Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AF274854.1-201ENST00000413236 615 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 RAD23BP2-201ENST00000416003 1207 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 ARL4AP2-201ENST00000507378 601 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 AC098799.2-201ENST00000509466 868 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.41□□□□□ -2.02
ABCA3Q99758 MTND5P4-201ENST00000514978 288 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 RNU6-943P-201ENST00000516960 98 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 AP000790.1-201ENST00000528891 737 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCA3Q99758 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCA3Q99758 RPS3AP23-202ENST00000574601 686 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 HMGN2P28-201ENST00000606102 262 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ABCA3Q99758 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
ABCA3Q99758 RNU6-392P-201ENST00000364926 101 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
ABCA3Q99758 AC234782.4-201ENST00000417646 1048 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 TOMM22P1-201ENST00000418578 312 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.4□□□□□ -2.02
ABCA3Q99758 ELOCP6-201ENST00000429066 328 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 RSL24D1P2-201ENST00000445584 366 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 ELOCP12-201ENST00000458706 328 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 MTND2P17-201ENST00000550281 688 ntBASIC2.4□□□□□ -2.02
ABCA3Q99758 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.4□□□□□ -2.02
ABCA3Q99758 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.4□□□□□ -2.03
ABCA3Q99758 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ABCA3Q99758 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ABCA3Q99758 RPL31P52-201ENST00000407532 367 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 VN1R31P-201ENST00000417498 730 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RPS15AP17-201ENST00000470598 390 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RPL21P103-201ENST00000479921 488 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ABCA3Q99758 MIR449C-201ENST00000516047 92 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ABCA3Q99758 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
ABCA3Q99758 AC067805.1-201ENST00000559344 470 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ABCA3Q99758 AC002984.1-201ENST00000591692 448 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 MIR8081-201ENST00000611533 95 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
ABCA3Q99758 AL512283.1-201ENST00000606756 1384 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 METTL21EP-201ENST00000298105 713 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ABCA3Q99758 RNA5SP338-201ENST00000410495 85 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RPS7P9-201ENST00000414704 586 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RPL30P3-201ENST00000424262 333 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 RPL7P37-201ENST00000425095 738 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 AC009965.2-201ENST00000425328 970 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.39□□□□□ -2.03
ABCA3Q99758 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.39□□□□□ -2.03
ABCA3Q99758 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
ABCA3Q99758 AC104986.1-201ENST00000517978 436 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 AC103987.3-201ENST00000582071 292 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 uc_338.5-201ENST00000611839 155 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 VN1R74P-201ENST00000613259 503 ntBASIC2.39□□□□□ -2.03
ABCA3Q99758 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
ABCA3Q99758 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ABCA3Q99758 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ABCA3Q99758 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
ABCA3Q99758 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.38□□□□□ -2.03
ABCA3Q99758 RNA5SP325-201ENST00000363756 130 ntBASIC2.38□□□□□ -2.03
ABCA3Q99758 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
ABCA3Q99758 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.38□□□□□ -2.03
ABCA3Q99758 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.38□□□□□ -2.03
ABCA3Q99758 RPS26P21-201ENST00000475397 348 ntBASIC2.38□□□□□ -2.03
ABCA3Q99758 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.38□□□□□ -2.03
ABCA3Q99758 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.38□□□□□ -2.03
ABCA3Q99758 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.38□□□□□ -2.03
ABCA3Q99758 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.38□□□□□ -2.03
ABCA3Q99758 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ABCA3Q99758 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
ABCA3Q99758 AC090617.7-201ENST00000623952 126 ntBASIC2.38□□□□□ -2.03
ABCA3Q99758 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ABCA3Q99758 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
ABCA3Q99758 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ABCA3Q99758 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 SNORD114-26-201ENST00000363543 72 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ABCA3Q99758 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 AC027124.2-201ENST00000428249 105 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.37□□□□□ -2.03
ABCA3Q99758 XKRY2-201ENST00000442362 1093 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 AC087190.1-201ENST00000484462 480 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RAC1P5-201ENST00000512182 576 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 AC107393.1-201ENST00000512403 346 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RNU6-56P-201ENST00000516986 93 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RNU4-60P-201ENST00000517239 135 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.37□□□□□ -2.03
ABCA3Q99758 WISP1-OT1-201ENST00000602893 642 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 CUL4AP1-201ENST00000514750 1863 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RPL19P1-201ENST00000411635 428 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 AC009237.2-201ENST00000421358 284 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 FO393414.1-201ENST00000428697 1184 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RPS4XP11-201ENST00000446897 772 ntBASIC2.37□□□□□ -2.03
ABCA3Q99758 RPL12P25-201ENST00000455592 494 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms