Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL21A1Q96P44 NIPA2P5-201ENST00000452282 464 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC244505.3-201ENST00000454598 187 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 SUMO2P2-201ENST00000456482 255 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 OR6K1P-201ENST00000456766 971 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC093801.2-201ENST00000503966 1050 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC008837.1-201ENST00000511513 412 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 HPRT1P3-201ENST00000539521 576 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 SETP7-201ENST00000552169 453 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 COX6CP3-201ENST00000580869 223 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC012669.1-201ENST00000603209 283 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC008962.1-201ENST00000605729 304 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL21A1Q96P44 AC004696.1-201ENST00000614345 607 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 AL359757.2-201ENST00000624309 274 ntBASIC2.64□□□□□ -1.99
COL21A1Q96P44 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL21A1Q96P44 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL21A1Q96P44 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL21A1Q96P44 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL21A1Q96P44 RNU6-1155P-201ENST00000363554 107 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 MIR592-201ENST00000384959 97 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC016769.3-201ENST00000396562 315 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC092447.6-201ENST00000414578 210 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 MRPL50P2-201ENST00000416821 482 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 USP9YP34-201ENST00000453983 808 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC103975.1-201ENST00000482506 483 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL21A1Q96P44 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC080014.1-201ENST00000496877 1201 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC016550.1-201ENST00000505348 785 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 EIF4BP1-201ENST00000554881 351 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC126365.2-201ENST00000580630 379 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC024153.1-201ENST00000603103 365 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC080013.4-201ENST00000607624 649 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 AP003122.6-201ENST00000623831 495 ntBASIC2.63□□□□□ -1.99
COL21A1Q96P44 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.63□□□□□ -1.99
COL21A1Q96P44 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL21A1Q96P44 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 ARF4P3-201ENST00000397387 509 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 RPS7P9-201ENST00000414704 586 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC013262.1-201ENST00000426710 252 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 MTCO1P3-201ENST00000429327 192 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC012497.1-201ENST00000429392 575 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AL590664.1-201ENST00000448065 339 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AL589880.1-201ENST00000448271 287 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 Z82190.1-201ENST00000454534 490 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC010460.2-201ENST00000509054 677 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 RNU6-1261P-201ENST00000517194 104 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 MTCO3P15-201ENST00000526563 574 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC092451.2-201ENST00000538746 658 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.62□□□□□ -1.99
COL21A1Q96P44 KC877982.1-201ENST00000602313 470 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AL390838.2-201ENST00000602394 274 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 RPL21P136-201ENST00000605378 396 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC012443.1-201ENST00000605605 231 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 AP003485.1-201ENST00000625093 753 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 MKKS-204ENST00000639674 192 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 Z99496.1-201ENST00000469424 1477 ntBASIC2.62□□□□□ -1.99
COL21A1Q96P44 TAB3P1-202ENST00000452645 1634 ntBASIC2.61□□□□□ -1.99
COL21A1Q96P44 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
COL21A1Q96P44 Y_RNA.25-201ENST00000362528 102 ntBASIC2.61□□□□□ -1.99
COL21A1Q96P44 AL512633.1-201ENST00000399931 655 ntBASIC2.61□□□□□ -1.99
COL21A1Q96P44 AL079342.2-201ENST00000403367 482 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms