Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FGF7P2-201ENST00000332473 296 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 SNORD116-9-201ENST00000384000 95 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 SNORD116-3-201ENST00000384287 95 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 SNORD116-7-201ENST00000384404 95 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 SNORD116-5-201ENST00000384462 95 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL590704.1-201ENST00000402856 794 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RPS16P5-201ENST00000406501 404 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 FAT1P1-201ENST00000406588 507 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RNA5SP36-201ENST00000410197 133 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RN7SKP140-201ENST00000411196 284 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RPS7P13-201ENST00000413955 498 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC245054.1-201ENST00000420944 258 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL356387.2-201ENST00000422272 243 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL358472.1-201ENST00000431295 329 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC011998.1-201ENST00000433403 117 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 ARL2BPP10-201ENST00000446487 531 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 NANOGP10-201ENST00000453325 895 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC010631.1-201ENST00000474150 156 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 NRON-201ENST00000517270 370 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AP003467.2-201ENST00000520175 319 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC093331.1-201ENST00000521474 169 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RPL21P5-201ENST00000554662 472 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 MIR4293-201ENST00000584305 78 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC093227.2-201ENST00000589357 285 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 BNIP3P8-201ENST00000597863 560 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC008277.2-201ENST00000605196 797 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC008962.1-201ENST00000605729 304 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC012409.3-201ENST00000611343 981 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC025594.3-201ENST00000613068 790 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 uc_338.12-201ENST00000616344 181 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AL603839.4-201ENST00000624658 1005 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC099654.13-201ENST00000639774 207 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 SNORD35B-201ENST00000363660 87 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RNY3P13-201ENST00000365542 102 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 SNORD116-1-201ENST00000384335 95 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AL583835.1-201ENST00000399570 407 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ELOCP17-201ENST00000414751 326 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 SETP8-201ENST00000435341 628 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 TAAR7P-201ENST00000436141 242 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC006011.1-201ENST00000442758 349 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC009237.8-201ENST00000445492 379 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC073387.1-201ENST00000453261 709 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RPL31P3-201ENST00000458430 332 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RPL35P6-201ENST00000490024 372 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC080014.1-201ENST00000496877 1201 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AK3P4-201ENST00000504283 583 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC091965.2-201ENST00000512324 613 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 RNU6-390P-201ENST00000516259 103 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 PAICSP4-201ENST00000517543 1253 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 SUMO2P20-201ENST00000520803 283 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC007115.1-201ENST00000546853 234 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC093012.1-202ENST00000549403 582 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC124947.2-202ENST00000552735 133 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC099489.2-201ENST00000574976 260 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 PIGPP4-201ENST00000584447 307 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC009977.1-201ENST00000586015 570 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC013553.2-201ENST00000604244 589 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC097065.2-201ENST00000608159 533 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AC091905.1-201ENST00000624400 311 ntBASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms