Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL359385.1-201ENST00000456509 365 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC013267.1-201ENST00000458227 267 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 RPL7P19-201ENST00000469948 618 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AP001086.1-201ENST00000494882 321 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC010587.1-201ENST00000505809 469 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC108475.1-201ENST00000507880 950 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 ZNF519P2-201ENST00000557032 169 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC234778.2-201ENST00000566241 354 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC092325.1-201ENST00000566449 554 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC121334.2-201ENST00000605387 271 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL590282.1-201ENST00000610379 1136 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 FAM27D1-201ENST00000612308 341 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL592295.2-201ENST00000612578 206 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC091905.1-201ENST00000624400 311 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL159972.1-201ENST00000625150 448 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC009902.3-201ENST00000606235 2172 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC011460.1-201ENST00000636268 1834 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS50Q96JG6 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 RNU4-12P-201ENST00000365233 139 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 Y_RNA.409-201ENST00000383990 98 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MIR181A1-201ENST00000385026 110 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 SNORD66.1-201ENST00000391230 76 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MTCO3P40-201ENST00000392516 676 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL022722.2-201ENST00000402519 180 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 RNU4-55P-201ENST00000410731 137 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MTCYBP24-201ENST00000420387 1106 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 RBMY1KP-201ENST00000423480 476 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 USP9YP18-201ENST00000425912 695 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 FCF1P1-201ENST00000432690 571 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MTND4LP10-201ENST00000435146 291 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 PSPHP1-201ENST00000450062 261 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 ANP32BP2-201ENST00000454525 545 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 SNORD121B-201ENST00000458838 81 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 RPL9P32-201ENST00000464118 620 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 PPIAP15-201ENST00000479662 484 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC006517.1-201ENST00000480485 328 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC104164.2-201ENST00000496953 495 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC005921.1-201ENST00000510589 286 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 RNU6-1220P-201ENST00000517126 108 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 MTCYBP41-201ENST00000528913 1123 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 SETP7-201ENST00000552169 453 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC099489.2-201ENST00000574976 260 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 NRBF2P1-201ENST00000587407 859 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL606834.2-201ENST00000602954 668 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC245014.2-201ENST00000603689 287 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC246785.4-201ENST00000605374 287 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MIR98-201ENST00000606724 119 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AL161734.1-201ENST00000609720 557 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC012531.5-201ENST00000611375 151 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VPS50Q96JG6 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC002550.2-201ENST00000621246 394 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 MIR492-201ENST00000638676 116 ntBASIC4.06□□□□□ -1.76
VPS50Q96JG6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms