Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 MIR1290-201ENST00000408735 78 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 TPMTP3-201ENST00000411928 735 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 USP9YP36-201ENST00000424581 829 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 ARPC3P2-201ENST00000457786 533 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC034268.2-201ENST00000571784 482 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC136618.2-201ENST00000575091 400 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AF131215.7-201ENST00000602443 707 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 YPEL5P2-201ENST00000605553 359 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AL139418.1-201ENST00000613613 177 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 MIR6076-201ENST00000617521 113 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC009039.2-201ENST00000624524 529 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AP000526.1-201ENST00000603308 1388 ntBASIC3.47□□□□□ -1.85
SIPA1Q96FS4 AC021755.1-201ENST00000559747 1447 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 SNORA1.3-201ENST00000384676 136 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 RSL24D1P4-201ENST00000400938 484 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 FAT1P1-201ENST00000406588 507 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MIR320C1-201ENST00000408566 88 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC091862.1-201ENST00000438016 1100 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC112653.1-201ENST00000443851 386 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 HMGN2P13-201ENST00000476476 274 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 HSPE1P6-201ENST00000479457 291 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AP001025.2-201ENST00000490908 477 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MTCYBP43-201ENST00000513621 740 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC034159.1-201ENST00000513885 583 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 RN7SKP265-201ENST00000516448 223 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MRPS36P3-201ENST00000519284 130 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 UBE2NP1-201ENST00000545592 458 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AL354943.1-201ENST00000572103 781 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MIR4760-201ENST00000585040 80 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AC004067.1-201ENST00000608733 700 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 TUSC7.1-201ENST00000610969 165 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MIR7112-201ENST00000616126 65 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MIR8057-201ENST00000620957 69 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MIR4275-201ENST00000636486 87 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
SIPA1Q96FS4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIPA1Q96FS4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 AL672167.1-206ENST00000356293 943 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 RNA5SP42-201ENST00000364278 115 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 SNORA48.2-201ENST00000390926 124 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 RPS3AP26-201ENST00000398259 784 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 RPS4XP3-201ENST00000398541 413 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 MTND4P13-201ENST00000402078 1023 ntBASIC3.45□□□□□ -1.86
SIPA1Q96FS4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.45□□□□□ -1.86
SIPA1Q96FS4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms