Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AL133153.1-201ENST00000557756 303 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 MIR3939-201ENST00000582614 106 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 BNIP3P30-201ENST00000601184 574 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AL049634.3-201ENST00000604968 457 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC093838.1-201ENST00000613014 469 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC063943.3-201ENST00000615562 356 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 MIR7702-201ENST00000621931 59 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC009033.1-201ENST00000624279 431 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC008785.1-201ENST00000624475 456 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC068254.2-201ENST00000623938 3577 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 SNORA72.1-201ENST00000363485 129 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 RPL23AP38-201ENST00000423801 469 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 SEPT14P3-201ENST00000439401 183 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL121871.1-201ENST00000443413 436 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL732372.2-207ENST00000445840 183 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC114755.5-201ENST00000447760 831 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 SEPT14P2-201ENST00000453405 183 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 RNU6-261P-201ENST00000459506 102 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 RPS3AP50-201ENST00000487064 803 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC108475.1-201ENST00000507880 950 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC008549.1-201ENST00000512900 643 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 SEPT14P4-201ENST00000513445 186 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 SCARNA24.1-201ENST00000516465 137 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 RNU4-60P-201ENST00000517239 135 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 FO082796.1-201ENST00000523795 183 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC063950.1-201ENST00000552036 308 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 RNA5SP108-201ENST00000605921 117 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AL731566.2-201ENST00000618971 317 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC092794.2-201ENST00000620933 563 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 FRG1KP-201ENST00000623592 341 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 ZNF680P1-201ENST00000436625 1469 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 MTND5P3-201ENST00000438536 1800 ntBASIC3.91□□□□□ -1.78
CTHRC1Q96CG8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.9□□□□□ -1.78
CTHRC1Q96CG8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.9□□□□□ -1.78
CTHRC1Q96CG8 CKAP2P1-201ENST00000555477 2049 ntBASIC3.9□□□□□ -1.78
CTHRC1Q96CG8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CTHRC1Q96CG8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CTHRC1Q96CG8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RNU2-9P-201ENST00000410194 145 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 SNRPEP10-201ENST00000420249 274 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms