Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC118469.1-201ENST00000442943 488 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC073387.1-201ENST00000453261 709 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 DNAJC19P1-201ENST00000455312 319 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
USP38Q8NB14 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 RPL7P47-201ENST00000497299 556 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC022447.3-201ENST00000506865 495 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC117532.1-201ENST00000514638 323 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.1□□□□□ -1.75
USP38Q8NB14 CR383656.7-201ENST00000548164 174 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.1□□□□□ -1.75
USP38Q8NB14 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.1□□□□□ -1.75
USP38Q8NB14 NCAPGP2-201ENST00000557911 754 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC034268.2-201ENST00000571784 482 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC099489.2-201ENST00000574976 260 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AL353997.4-201ENST00000586196 166 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AC110760.3-201ENST00000598794 467 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 AC092354.1-201ENST00000606057 376 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.1□□□□□ -1.75
USP38Q8NB14 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP38Q8NB14 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP38Q8NB14 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
USP38Q8NB14 AL049780.3-201ENST00000624612 1583 ntBASIC4.1□□□□□ -1.75
USP38Q8NB14 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP38Q8NB14 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP38Q8NB14 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP38Q8NB14 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP38Q8NB14 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AL138878.1-201ENST00000405131 347 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AL138880.1-201ENST00000405824 642 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 MIR1305-201ENST00000408300 86 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 MTCO3P12-201ENST00000416718 547 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 RPS27AP14-201ENST00000422868 454 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 AL445669.1-201ENST00000426743 755 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 EPS15P1-201ENST00000448836 336 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.09□□□□□ -1.75
USP38Q8NB14 AC098824.1-201ENST00000453565 980 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 Z82190.1-201ENST00000454534 490 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 RPL21P10-201ENST00000463521 490 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AL024509.2-201ENST00000493462 493 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 RANP9-201ENST00000519957 271 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 MTCYBP41-201ENST00000528913 1123 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 SETP7-201ENST00000552169 453 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
USP38Q8NB14 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 LARP7P3-201ENST00000579888 337 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.09□□□□□ -1.75
USP38Q8NB14 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.09□□□□□ -1.75
USP38Q8NB14 AC010928.3-201ENST00000587712 541 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
USP38Q8NB14 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP38Q8NB14 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.09□□□□□ -1.75
USP38Q8NB14 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.09□□□□□ -1.76
USP38Q8NB14 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.76
USP38Q8NB14 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP38Q8NB14 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
USP38Q8NB14 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP38Q8NB14 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP38Q8NB14 RNU5F-6P-201ENST00000362979 116 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 SNORD116-1-201ENST00000384335 95 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP38Q8NB14 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USP38Q8NB14 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.08□□□□□ -1.76
USP38Q8NB14 RAD23BP2-201ENST00000416003 1207 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 TOMM22P1-201ENST00000418578 312 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.08□□□□□ -1.76
USP38Q8NB14 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.08□□□□□ -1.76
USP38Q8NB14 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.08□□□□□ -1.76
USP38Q8NB14 RPL37P21-201ENST00000435890 276 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 RSU1P2-202ENST00000437884 485 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.08□□□□□ -1.76
USP38Q8NB14 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.08□□□□□ -1.76
USP38Q8NB14 RNU7-170P-201ENST00000459303 61 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC084198.1-201ENST00000477747 402 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC068724.1-201ENST00000487100 792 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC096576.1-201ENST00000489014 359 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC034222.1-201ENST00000494052 532 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC020893.1-201ENST00000502452 580 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC026784.1-201ENST00000507986 352 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms