Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC078899.3-201ENST00000599065 212 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 FAM27E2-201ENST00000619668 403 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC078938.1-201ENST00000620993 318 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC109780.1-201ENST00000451768 1344 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC116096.1-201ENST00000566804 2314 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC104966.1-201ENST00000467010 1464 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 RNU6-1167P-201ENST00000363227 94 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 RNU6-173P-201ENST00000364215 104 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 Y_RNA.518-201ENST00000384552 113 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 SAR1AP2-201ENST00000392696 594 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 MIR548I3-201ENST00000408378 149 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 MIR548I1-201ENST00000408810 149 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 EIF4EP2-201ENST00000422816 654 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC007679.3-201ENST00000434035 414 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC094019.1-201ENST00000434678 472 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC083899.1-201ENST00000454465 3819 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC133134.1-201ENST00000466800 359 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC104109.1-201ENST00000498563 436 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 TXNP4-201ENST00000575018 310 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC098826.3-201ENST00000603823 466 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC103858.2-201ENST00000621471 543 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 AC032011.1-201ENST00000611703 1549 ntBASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.47□□□□□ -1.53
DEPDC4Q8N2C3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
DEPDC4Q8N2C3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
DEPDC4Q8N2C3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 RNU105B-201ENST00000364478 208 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 RN7SKP78-201ENST00000364711 318 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 SNORA5.1-201ENST00000384275 131 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 NDUFB1P2-201ENST00000449477 176 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 RPL38P3-201ENST00000484463 213 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC108145.1-201ENST00000503770 153 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 RNA5SP471-201ENST00000516971 106 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC084851.1-201ENST00000529105 249 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC126615.2-201ENST00000553003 515 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC004584.2-201ENST00000570407 410 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC002545.1-201ENST00000592511 181 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AL161798.1-201ENST00000604630 131 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC010615.1-201ENST00000594254 1764 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AL731566.1-201ENST00000620490 1937 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 AC100757.1-201ENST00000616872 1835 ntBASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DEPDC4Q8N2C3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AL356489.2-201ENST00000566968 3528 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 DEFB108F-201ENST00000344638 222 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms