Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MIR7153-201ENST00000637758 57 ntBASIC2.55□□□□□ -2
LINC01561Q8N1V8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01561Q8N1V8 AC092125.1-201ENST00000562568 1995 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC104454.1-201ENST00000421341 1401 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNU5A-8P-201ENST00000364102 114 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNU6-283P-201ENST00000364788 107 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 MIR325-201ENST00000385260 98 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 MIR1289-1-201ENST00000408836 144 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RAP1BP1-201ENST00000412709 553 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RPL21P24-201ENST00000413752 448 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC017079.2-201ENST00000416102 485 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL365496.1-201ENST00000426885 215 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL512649.1-201ENST00000428997 581 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 FTH1P1-201ENST00000437933 532 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL008629.1-201ENST00000438615 184 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL714022.1-201ENST00000439897 151 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 HMGB3P11-201ENST00000440127 604 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AL831737.1-201ENST00000441288 271 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 SETD6P1-201ENST00000444575 317 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC020550.1-201ENST00000447385 163 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC108059.3-201ENST00000456388 214 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 snoU13.28-201ENST00000459235 104 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC091179.1-201ENST00000461606 579 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 MTND4LP3-201ENST00000468320 276 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC116337.2-201ENST00000477662 156 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 LARP1BP2-201ENST00000486594 519 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC055855.1-201ENST00000489563 579 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC092185.1-201ENST00000491371 97 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNU6-927P-201ENST00000516199 100 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNU6-579P-201ENST00000516879 102 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC008011.1-201ENST00000545989 227 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC093012.1-202ENST00000549403 582 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 MTCO3P24-201ENST00000572729 782 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 MIR4738-201ENST00000579134 87 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 BNIP3P38-201ENST00000601117 544 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 U73023.1-201ENST00000603134 700 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC091965.4-201ENST00000607691 587 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC114781.5-201ENST00000615297 108 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 SNHG22-203ENST00000617833 660 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 AC012150.2-201ENST00000621300 544 ntBASIC2.54□□□□□ -2
LINC01561Q8N1V8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01561Q8N1V8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01561Q8N1V8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 RNU6-1284P-201ENST00000363701 100 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 RNU1-39P-201ENST00000383897 165 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC025750.1-201ENST00000399891 379 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 HMGN2P30-201ENST00000423237 256 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC091390.3-201ENST00000426478 338 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AL691449.1-201ENST00000426570 421 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 MTND1P20-201ENST00000430341 950 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 ARPC3P1-201ENST00000437218 533 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC005094.1-201ENST00000440420 368 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC006539.3-201ENST00000454258 129 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC087588.1-201ENST00000462203 316 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 RN7SL601P-201ENST00000471221 293 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC105137.1-201ENST00000484355 562 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 AL160314.1-201ENST00000490836 438 ntBASIC2.53□□□□□ -2
LINC01561Q8N1V8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01561Q8N1V8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.53□□□□□ -2
LINC01561Q8N1V8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms