Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-818P-201ENST00000364837 108 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.441-201ENST00000384123 112 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 RNU6-921P-201ENST00000384361 107 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.533-201ENST00000384596 114 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC096921.1-201ENST00000411661 375 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 RNF10P1-201ENST00000418589 369 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC006946.1-201ENST00000429106 328 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 RPL7AP10-201ENST00000481016 791 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC022133.1-201ENST00000490961 571 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC074250.1-201ENST00000511117 192 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 NDUFB4P9-201ENST00000511646 388 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC010186.2-204ENST00000537668 439 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 MIR3613-201ENST00000579844 87 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AL158032.1-201ENST00000605401 106 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC012443.1-201ENST00000605605 231 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 AC103710.2-202ENST00000641454 2853 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AC114947.2-201ENST00000565748 2125 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.82-201ENST00000363000 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.92-201ENST00000363043 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.235-201ENST00000364412 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.306-201ENST00000365015 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.308-201ENST00000365043 101 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.312-201ENST00000365089 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.322-201ENST00000365151 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.590-201ENST00000410140 107 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 EI24P1-201ENST00000416584 867 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 RPS26P40-201ENST00000435209 294 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 FABP5P13-201ENST00000452144 328 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.650-201ENST00000459002 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 ACA59.1-201ENST00000515966 143 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 SNORD116-25-201ENST00000516517 92 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 RNU6-1234P-201ENST00000516877 103 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 RNU6-798P-201ENST00000516912 103 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.777-201ENST00000516982 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AP005403.1-201ENST00000579720 229 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.771-201ENST00000598668 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AL158827.2-201ENST00000602494 330 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.789-201ENST00000622480 102 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AC000123.2-201ENST00000623124 461 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AL691447.3-201ENST00000635020 330 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 AL445487.1-201ENST00000415694 1580 ntBASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS3Q8IXF0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC144833.1-201ENST00000567953 4089 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 SNORA17.1-201ENST00000362945 126 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNU4-7P-201ENST00000364758 141 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.331-201ENST00000365267 102 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNU6-596P-201ENST00000365395 98 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNU6-80P-201ENST00000384195 107 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AL357075.1-201ENST00000404107 726 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNA5SP487-201ENST00000410186 122 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RN7SKP222-201ENST00000410651 315 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RN7SKP17-201ENST00000411242 351 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC093162.1-201ENST00000419682 124 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RPL35AP22-201ENST00000436855 335 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms