Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC092427.1-201ENST00000439177 601 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 NIPA2P5-201ENST00000452282 464 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 RFC5P1-201ENST00000454419 874 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 RPS15AP17-201ENST00000470598 390 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 TMEM251P1-201ENST00000503717 318 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 SNORA31.15-201ENST00000516771 132 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AP003102.1-201ENST00000525638 661 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC022690.1-201ENST00000526681 550 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AP002404.1-201ENST00000532005 451 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 HPRT1P3-201ENST00000539521 576 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 H3F3AP1-201ENST00000559984 334 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 MIR3912-201ENST00000577566 105 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 BNIP3P24-201ENST00000593398 557 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC112220.2-201ENST00000605513 533 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC008962.1-201ENST00000605729 304 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC005332.6-201ENST00000613178 446 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AL162274.2-201ENST00000614406 332 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AL355493.4-201ENST00000618530 292 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC091046.2-201ENST00000620775 665 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC104985.3-201ENST00000623479 597 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC010872.1-201ENST00000624225 675 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC120349.2-201ENST00000625002 298 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AP003485.1-201ENST00000625093 753 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC106858.1-201ENST00000637497 429 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AC107982.1-201ENST00000507171 1300 ntBASIC2.96□□□□□ -1.93
CCDC50Q8IVM0 AC109315.1-201ENST00000584143 1347 ntBASIC2.96□□□□□ -1.93
CCDC50Q8IVM0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 MIR422A-201ENST00000362286 90 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 RNU6-216P-201ENST00000363282 104 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 RNU6-1155P-201ENST00000363554 107 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 SNORA25.6-201ENST00000364121 118 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 DHFRP6-201ENST00000401776 268 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 HMGN2P35-201ENST00000412164 270 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC233728.2-201ENST00000425348 757 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 GTF2IP3-201ENST00000433887 494 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AL589880.1-201ENST00000448271 287 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC023424.2-201ENST00000493479 777 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC010625.1-201ENST00000511296 403 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC112206.4-201ENST00000515142 405 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC118942.1-201ENST00000529674 1035 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 OR4K8P-201ENST00000578842 1048 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 RPL23AP92-201ENST00000603609 255 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AL035411.2-201ENST00000604022 421 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AL356585.4-201ENST00000623078 1229 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AC010297.1-201ENST00000623948 149 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 AP002371.2-201ENST00000624450 503 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC50Q8IVM0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MIR135A2-201ENST00000384854 100 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MIR506-201ENST00000384998 124 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AL355143.1-201ENST00000407101 841 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 RPS15AP38-201ENST00000413110 372 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC007435.1-201ENST00000421086 415 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC007742.1-201ENST00000425789 329 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AL512649.1-201ENST00000428997 581 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AL590233.1-201ENST00000430017 456 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 RPS20P5-201ENST00000434808 360 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 ELOCP26-201ENST00000436067 329 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC093156.1-201ENST00000440382 670 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 RAC1P7-201ENST00000445367 377 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC026410.2-201ENST00000460281 156 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC003982.1-202ENST00000469928 248 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MTCYBP17-201ENST00000503579 789 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 COX7A2P2-201ENST00000505291 250 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 RNU6-276P-201ENST00000516114 96 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 SNORA9.3-201ENST00000516383 129 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 HMGB1P41-201ENST00000520234 440 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 HSPE1P20-201ENST00000538133 289 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 SETP7-201ENST00000552169 453 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MTND3P13-201ENST00000574391 343 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC012493.2-201ENST00000595083 291 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms