Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RNU4-78P-201ENST00000410940 126 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RNA5SP31-201ENST00000411144 127 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 MTATP6P27-201ENST00000416987 621 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 MTCO2P5-201ENST00000422621 426 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC010975.2-201ENST00000427781 588 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC016712.1-201ENST00000431088 378 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 FAM103A2P-201ENST00000444122 354 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 H2AFZP6-201ENST00000444403 394 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 Z82190.1-201ENST00000454534 490 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC007967.1-201ENST00000455422 1159 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 HMGB3P30-201ENST00000457863 606 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 SNORD42A-201ENST00000459584 64 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RN7SL323P-201ENST00000494712 295 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RNU6-720P-201ENST00000516363 108 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RN7SKP116-201ENST00000516902 319 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AP003122.4-201ENST00000530980 758 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC037471.2-201ENST00000564941 598 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL136363.2-201ENST00000604173 851 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC107304.1-201ENST00000604229 296 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL591034.3-201ENST00000605511 685 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC012531.5-201ENST00000611375 151 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL589743.7-201ENST00000612637 233 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC008498.1-201ENST00000613012 531 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC138932.5-201ENST00000617759 563 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC040168.1-201ENST00000623594 991 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC091925.2-201ENST00000625059 256 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC097714.1-201ENST00000511272 1647 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RNU6-878P-201ENST00000384578 110 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPL7P60-201ENST00000397636 735 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RNU2-15P-201ENST00000410692 191 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 USP9YP13-201ENST00000417797 480 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPL21P32-201ENST00000419877 477 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC244098.2-201ENST00000422068 99 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPS3AP44-201ENST00000425466 790 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AP000907.1-201ENST00000428428 510 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 SDCBPP1-201ENST00000440192 890 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 PGBD4P3-201ENST00000440731 581 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AL357552.1-201ENST00000445254 415 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 SUMO2P2-201ENST00000456482 255 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC010618.1-201ENST00000469924 477 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPL7P19-201ENST00000469948 618 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RN7SL442P-201ENST00000473804 320 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPS4XP22-201ENST00000480755 780 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC078817.1-201ENST00000492623 435 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 CEACAMP10-202ENST00000495431 496 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 RPL37P25-201ENST00000507308 276 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 PAICSP4-201ENST00000517543 1253 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 OR4R3P-201ENST00000525084 838 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AP002453.2-201ENST00000533503 320 ntBASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRTM1Q86UE6 AC009063.1-201ENST00000563342 702 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms