Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RNU5A-7P-201ENST00000515979 116 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 RNU6-27P-201ENST00000516146 107 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 RN7SKP40-201ENST00000517211 242 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 OR4P1P-201ENST00000530808 1136 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AP001317.1-201ENST00000531194 960 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AP001542.2-201ENST00000593141 364 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AL158211.2-201ENST00000607282 395 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 SNHG22-203ENST00000617833 660 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AL355493.4-201ENST00000618530 292 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 AL512506.2-201ENST00000624472 458 ntBASIC2.59□□□□□ -1.99
RTL4Q6ZR62 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTL4Q6ZR62 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
RTL4Q6ZR62 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.58□□□□□ -2
RTL4Q6ZR62 AC234775.1-201ENST00000454247 670 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.58□□□□□ -2
RTL4Q6ZR62 AP000852.1-201ENST00000472460 573 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 MTCO3P27-201ENST00000514397 196 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 SNORA48.10-201ENST00000516965 160 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AC023632.1-201ENST00000518463 375 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 COX6CP8-201ENST00000522620 226 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 OR10V3P-201ENST00000525712 725 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 EEF1B2P4-201ENST00000551398 348 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.58□□□□□ -2
RTL4Q6ZR62 CYCSP39-201ENST00000565821 309 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AC090330.1-201ENST00000588646 764 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 GLUD1P4-201ENST00000590914 418 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AP001330.4-201ENST00000604350 154 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.58□□□□□ -2
RTL4Q6ZR62 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.58□□□□□ -2
RTL4Q6ZR62 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 AC068880.4-201ENST00000623082 495 ntBASIC2.58□□□□□ -2
RTL4Q6ZR62 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
RTL4Q6ZR62 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RTL4Q6ZR62 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTL4Q6ZR62 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTL4Q6ZR62 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTL4Q6ZR62 MIR26A1-201ENST00000362205 77 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 RNU6-1074P-201ENST00000383995 104 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 Y_RNA.510-201ENST00000384511 114 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 SNORA1.3-201ENST00000384676 136 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC016769.3-201ENST00000396562 315 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 RPS4XP3-201ENST00000398541 413 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC241584.1-201ENST00000438469 1241 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AL513043.1-201ENST00000439124 535 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC112653.1-201ENST00000443851 386 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 MTCO1P48-201ENST00000448024 1096 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC004924.1-201ENST00000480160 781 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.57□□□□□ -2
RTL4Q6ZR62 DYNLL1P6-201ENST00000503440 264 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC010625.1-201ENST00000511296 403 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC119751.5-201ENST00000514077 770 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.57□□□□□ -2
RTL4Q6ZR62 SNRPGP16-201ENST00000533275 226 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC044913.1-201ENST00000557200 430 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.57□□□□□ -2
RTL4Q6ZR62 AC090666.1-201ENST00000578241 445 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTL4Q6ZR62 AP003973.1-201ENST00000604639 691 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 ATP1B3P1-201ENST00000605365 821 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AL161734.1-201ENST00000609720 557 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AL353748.2-201ENST00000622148 471 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 ZNF663P-202ENST00000641770 1131 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
RTL4Q6ZR62 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.57□□□□□ -2
RTL4Q6ZR62 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms