Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RPL7AP25-201ENST00000423357 805 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 DUTP6-201ENST00000425573 462 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC005094.1-201ENST00000440420 368 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 MTND1P18-201ENST00000448191 573 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC010655.1-201ENST00000449336 292 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 RPL37P6-202ENST00000464216 403 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC011276.1-201ENST00000469688 323 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 RPL7P19-201ENST00000469948 618 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 RPS27AP1-201ENST00000475545 471 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 NIP7P2-201ENST00000485801 544 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-64P-201ENST00000517119 105 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AL161713.1-201ENST00000555538 145 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 NCAPGP2-201ENST00000557911 754 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC005668.1-201ENST00000571142 476 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC010928.3-201ENST00000587712 541 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AP001029.3-201ENST00000588063 596 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AL669831.4-202ENST00000590817 238 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC020910.2-201ENST00000603635 610 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-89P-201ENST00000606519 100 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC135507.2-201ENST00000612443 309 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 TPTEP1-208ENST00000636884 213 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AC093535.2-201ENST00000624769 2326 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC011155.1-201ENST00000316512 456 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-960P-201ENST00000364056 120 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 RNU5E-6P-201ENST00000365574 115 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 SNORA70E-201ENST00000384492 135 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AL122016.1-201ENST00000403365 367 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 MIR1302-11-201ENST00000408051 138 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 MIR1302-9-201ENST00000408365 138 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 MIR1302-10-201ENST00000408734 138 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 RNU4-26P-201ENST00000410270 107 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 E2F6P2-201ENST00000420708 748 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AL645937.1-202ENST00000421799 937 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 RPL21P126-201ENST00000470049 478 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC135721.1-201ENST00000497954 479 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC021146.3-201ENST00000511911 260 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 FAM60DP-201ENST00000524174 632 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 PSMA2P1-201ENST00000526365 646 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AP005435.4-201ENST00000529514 284 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC005034.5-201ENST00000604219 466 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 MIR1302-2-201ENST00000607096 138 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AL050343.2-201ENST00000607338 280 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 AC011944.2-201ENST00000624440 683 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 MAPK10-303ENST00000641324 3959 ntBASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.13□□□□□ -1.59
RUFY4Q6ZNE9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 AC022893.2-201ENST00000564832 3296 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 AL139811.1-201ENST00000424779 2299 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-552P-201ENST00000362869 119 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU4-44P-201ENST00000363050 141 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 SNORA71.2-201ENST00000364941 134 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU11-4P-201ENST00000391149 133 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 SNORA68.2-201ENST00000391263 128 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-903P-201ENST00000391270 109 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 TXNP7-201ENST00000406296 293 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNU2-47P-201ENST00000410649 186 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RN7SKP27-201ENST00000410684 333 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 RNA5SP107-201ENST00000411358 122 ntBASIC5.12□□□□□ -1.59
RUFY4Q6ZNE9 AC009237.10-201ENST00000414112 510 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms