Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL512347.1-201ENST00000566420 503 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC103881.1-201ENST00000603476 538 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AL160281.1-201ENST00000605307 311 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC009318.4-201ENST00000620496 486 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AC007490.1-201ENST00000624321 703 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
RFWD3Q6PCD5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 RPL23AP57-201ENST00000332361 466 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC016769.3-201ENST00000396562 315 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AF228730.1-201ENST00000397972 663 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 RSL24D1P4-201ENST00000400938 484 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 MIR1284-201ENST00000408337 120 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 RPS25P9-201ENST00000435591 252 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL008629.1-201ENST00000438615 184 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 TRIM60P18-201ENST00000441518 828 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 GAPDHP27-201ENST00000447427 1020 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC093392.2-201ENST00000450682 337 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 TRGVB-201ENST00000453257 471 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 S100A11P2-201ENST00000467589 312 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 PABPC1P3-201ENST00000469174 459 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC108860.1-201ENST00000484521 383 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC093767.1-201ENST00000504523 156 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 IGKV2D-36-201ENST00000518643 226 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 MTATP6P15-201ENST00000527233 835 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 UBTFL10-201ENST00000528532 562 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 ZNF321P-202ENST00000550843 495 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 LARP7P2-201ENST00000575306 125 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 MIR4637-201ENST00000582405 84 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL109653.1-201ENST00000603091 248 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AL031281.1-201ENST00000604049 488 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC025588.3-201ENST00000604182 274 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC112220.3-201ENST00000605502 502 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC006270.3-201ENST00000605967 1036 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC245297.2-201ENST00000610119 565 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC243773.3-201ENST00000613270 256 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC084035.1-201ENST00000634543 607 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 U6.101-201ENST00000637707 76 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AP001350.1-201ENST00000601906 1524 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 GDI2P1-201ENST00000429312 1336 ntBASIC3.18□□□□□ -1.9
RFWD3Q6PCD5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 RNU6-730P-201ENST00000383954 104 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 AC107081.1-201ENST00000414975 361 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 TOMM22P1-201ENST00000418578 312 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 AC091390.3-201ENST00000426478 338 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 AL035410.1-201ENST00000427409 427 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 CETN4P-201ENST00000432407 469 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 MTND4P6-201ENST00000438297 472 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 MTND2P19-201ENST00000449129 1012 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 RSL24D1P3-201ENST00000449255 495 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 RPS15AP17-201ENST00000470598 390 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 ST13P14-201ENST00000474095 734 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 OR5H5P-201ENST00000503164 928 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 MTCYBP17-201ENST00000503579 789 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 PSMA2P1-201ENST00000526365 646 ntBASIC3.17□□□□□ -1.9
RFWD3Q6PCD5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms