Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RPL34P26-201ENST00000445636 354 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC098799.2-201ENST00000509466 868 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 SNORA31.15-201ENST00000516771 132 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC104581.2-201ENST00000572227 430 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC103810.1-201ENST00000579873 453 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 Z99714.1-201ENST00000450463 807 ntBASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 OR7L1P-201ENST00000456181 380 ntBASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 AC140059.1-201ENST00000489238 361 ntBASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 MTND4P23-201ENST00000447723 1363 ntBASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
VPS13DQ5THJ4 AF274854.1-201ENST00000413236 615 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AL356280.1-201ENST00000603614 379 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC093536.2-201ENST00000565257 1406 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 RNA5SP138-201ENST00000365098 114 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 MIR613-201ENST00000385248 95 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 TOMM22P1-201ENST00000418578 312 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AL021397.1-201ENST00000451806 248 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AL137159.1-201ENST00000452808 512 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC089999.1-201ENST00000460336 374 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC073901.1-201ENST00000462471 408 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 RPL21P39-201ENST00000463605 483 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC108734.3-201ENST00000481241 1165 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 RNA5SP37-201ENST00000365420 130 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AL031659.1-201ENST00000447075 539 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 YWHAQP7-201ENST00000603536 658 ntBASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
VPS13DQ5THJ4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC117532.1-201ENST00000514638 323 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 RNU2-58P-201ENST00000516403 183 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AP000907.2-201ENST00000530827 353 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 CKAP2P1-201ENST00000555477 2049 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AL596028.1-201ENST00000326971 197 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 MTND5P4-201ENST00000514978 288 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC011604.1-201ENST00000545978 196 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC015720.1-201ENST00000565251 277 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 RPL23AP88-201ENST00000605759 454 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 SUMO1P4-201ENST00000429430 302 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC090774.1-201ENST00000435925 246 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AL590762.3-201ENST00000436372 640 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 XKRYP6-201ENST00000440468 1116 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 XKRYP3-201ENST00000442113 1116 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC234775.3-201ENST00000564612 656 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
VPS13DQ5THJ4 ZNF271P-202ENST00000465539 1970 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC092638.1-201ENST00000411966 1275 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 SETP8-201ENST00000435341 628 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 HMGN1P28-201ENST00000521340 364 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC087241.2-201ENST00000535801 324 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 ZNF192P1-203ENST00000565888 810 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC002984.1-201ENST00000591692 448 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 RNU6-84P-201ENST00000607737 102 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 XKRYP4-201ENST00000414395 483 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 XKRYP5-201ENST00000449659 483 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 AC008526.1-201ENST00000509149 338 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 RNA5SP82-201ENST00000516707 92 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 RN7SKP40-201ENST00000517211 242 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 PTP4A1P6-201ENST00000531034 478 ntBASIC1.13□□□□□ -2.23
VPS13DQ5THJ4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms