Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP41Q3LFD5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
USP41Q3LFD5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
USP41Q3LFD5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP41Q3LFD5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
USP41Q3LFD5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 RNU4-21P-201ENST00000362802 126 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 U3.4-201ENST00000363352 213 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 RNU6-1207P-201ENST00000384343 107 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AL583834.1-201ENST00000406943 343 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 AL513174.1-201ENST00000423182 629 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 RPL37P21-201ENST00000435890 276 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 MTCO2P16-201ENST00000436962 677 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 RSU1P2-202ENST00000437884 485 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 TRIM60P18-201ENST00000441518 828 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 COX6CP12-201ENST00000446748 202 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AL353691.1-201ENST00000451332 387 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 ANP32BP2-201ENST00000454525 545 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 BX510359.1-201ENST00000456973 237 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 U3.44-201ENST00000458938 192 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 snoU109.4-201ENST00000458953 143 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 RN7SL807P-201ENST00000470923 297 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 ST13P14-201ENST00000474095 734 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC116337.2-201ENST00000477662 156 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 AF131216.2-201ENST00000512316 564 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC091965.2-201ENST00000512324 613 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 ZNF415P1-201ENST00000582279 1166 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 NBR2-204ENST00000587322 63 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC112187.2-201ENST00000604345 283 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AL160281.1-201ENST00000605307 311 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AC245008.1-201ENST00000608123 476 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 AL158063.1-201ENST00000615349 536 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
USP41Q3LFD5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP41Q3LFD5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.78□□□□□ -1.8
USP41Q3LFD5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP41Q3LFD5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP41Q3LFD5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP41Q3LFD5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AL049780.3-201ENST00000624612 1583 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 Y_RNA.77-201ENST00000362962 107 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 Y_RNA.97-201ENST00000363094 102 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU6-97P-201ENST00000363387 104 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU6-769P-201ENST00000384407 104 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU2-47P-201ENST00000410649 186 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNA5SP120-201ENST00000410900 112 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 OR1AA1P-201ENST00000419597 916 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC091390.3-201ENST00000426478 338 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 RPS29P31-201ENST00000446147 164 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AP000936.2-201ENST00000447151 681 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC023598.1-201ENST00000472521 361 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU2-27P-201ENST00000516185 142 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 Y_RNA.695-201ENST00000516715 107 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 RNU6-579P-201ENST00000516879 102 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC025881.1-201ENST00000518851 512 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC091489.2-201ENST00000566263 604 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 MIR4307-201ENST00000582802 84 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.77□□□□□ -1.81
USP41Q3LFD5 AP000403.1-201ENST00000603349 851 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AL365503.1-201ENST00000605247 905 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 BCRP9-201ENST00000605312 388 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AL592295.2-201ENST00000612578 206 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC092628.2-201ENST00000622492 339 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 MIR3651-201ENST00000630427 90 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC093591.3-201ENST00000634516 308 ntBASIC3.77□□□□□ -1.81
USP41Q3LFD5 AC138649.5-201ENST00000637456 137 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms