Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AL389895.1-201ENST00000554127 252 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 MYL12BP1-201ENST00000569826 507 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC080078.3-201ENST00000605407 463 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC034102.8-201ENST00000615146 484 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC092159.4-201ENST00000624944 550 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 HSPD1P16-201ENST00000402302 394 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC093084.1-201ENST00000424233 687 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 KATNBL1P3-201ENST00000443475 909 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC135999.1-201ENST00000478962 479 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC005730.3-201ENST00000583067 366 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 AC245036.5-201ENST00000596330 847 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 ABI1P1-201ENST00000603375 1120 ntBASIC1.62□□□□□ -2.15
CHD9Q3L8U1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHD9Q3L8U1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC017099.1-201ENST00000448261 1028 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC098583.1-201ENST00000480875 255 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 HMGB3P26-201ENST00000560051 582 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 MIR598-201ENST00000384868 97 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AL136133.1-201ENST00000413694 376 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AL138785.1-201ENST00000425821 331 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC002487.1-201ENST00000604565 994 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC132825.8-201ENST00000640783 297 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHD9Q3L8U1 MTCO3P44-201ENST00000510977 541 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 RNU2-58P-201ENST00000516403 183 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC022634.1-201ENST00000520765 532 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC107918.3-201ENST00000533272 382 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC017076.1-201ENST00000607613 578 ntBASIC1.61□□□□□ -2.15
CHD9Q3L8U1 AC006026.1-201ENST00000444025 1803 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 MTCO1P14-201ENST00000441695 1559 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 ERHP2-201ENST00000402323 299 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 HMGB3P2-201ENST00000411913 584 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 PTP4A1P1-201ENST00000420539 515 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AIG1P1-201ENST00000503376 148 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 MTCO1P6-201ENST00000481192 1384 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AC073136.2-201ENST00000417282 849 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AC008571.1-201ENST00000467232 300 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 AL512283.1-201ENST00000606756 1384 ntBASIC1.6□□□□□ -2.15
CHD9Q3L8U1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD9Q3L8U1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHD9Q3L8U1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHD9Q3L8U1 RNU6-1263P-201ENST00000384601 106 ntBASIC1.59□□□□□ -2.15
CHD9Q3L8U1 MCTS2P-201ENST00000394552 546 ntBASIC1.59□□□□□ -2.15
CHD9Q3L8U1 HMGN2P18-201ENST00000450680 270 ntBASIC1.59□□□□□ -2.15
CHD9Q3L8U1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.59□□□□□ -2.15
CHD9Q3L8U1 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
CHD9Q3L8U1 AL137072.1-201ENST00000603444 466 ntBASIC1.59□□□□□ -2.15
CHD9Q3L8U1 RPL19P1-201ENST00000411635 428 ntBASIC1.59□□□□□ -2.16
CHD9Q3L8U1 AC034222.1-201ENST00000494052 532 ntBASIC1.59□□□□□ -2.16
CHD9Q3L8U1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.59□□□□□ -2.16
CHD9Q3L8U1 AC021146.7-201ENST00000509604 775 ntBASIC1.59□□□□□ -2.16
CHD9Q3L8U1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CHD9Q3L8U1 RNU4-51P-201ENST00000364206 140 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AL023807.1-201ENST00000407932 359 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AL513185.2-201ENST00000425543 193 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 SUMO2P6-201ENST00000505273 288 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AC084851.1-201ENST00000529105 249 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AC007536.1-201ENST00000533382 349 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 CR382285.2-201ENST00000624662 1495 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 RNA5SP37-201ENST00000365420 130 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AF131216.2-201ENST00000512316 564 ntBASIC1.58□□□□□ -2.16
CHD9Q3L8U1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD9Q3L8U1 AC008126.1-201ENST00000549019 480 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms