| PAX8 | Q06710 | ZNF415P1-201 | ENST00000582279 | 1166 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC002546.2-201 | ENST00000585537 | 584 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL353997.4-201 | ENST00000586196 | 166 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC007687.1-201 | ENST00000602704 | 304 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SEPT7P9-203 | ENST00000604116 | 343 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL136363.2-201 | ENST00000604173 | 851 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC110741.2-201 | ENST00000605278 | 268 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC097717.1-249 | ENST00000608040 | 401 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC138932.5-201 | ENST00000617759 | 563 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC026585.1-201 | ENST00000619582 | 524 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | U7.8-201 | ENST00000619968 | 63 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC244258.1-201 | ENST00000637553 | 1071 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AP000553.6-201 | ENST00000641242 | 118 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | CCT4P2-201 | ENST00000233836 | 1548 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ZNF92-204 | ENST00000450302 | 2957 nt | TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | CYP3A7-201 | ENST00000336374 | 1971 nt | APPRIS P1 TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ZNF99-201 | ENST00000397104 | 3114 nt | APPRIS P1 TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | EVI5-201 | ENST00000370331 | 7403 nt | APPRIS P3 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MGST1-207 | ENST00000535309 | 1331 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC019117.3-201 | ENST00000637807 | 3523 nt | APPRIS P1 TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | PIGN-210 | ENST00000588571 | 1960 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | PABPC1P7-201 | ENST00000413177 | 1513 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | LINC00301-201 | ENST00000320202 | 852 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RNU6-989P-201 | ENST00000362756 | 107 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | C1orf100-202 | ENST00000366537 | 483 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | PARD3-204 | ENST00000374768 | 799 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RNU6-533P-201 | ENST00000384144 | 107 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | HMGN1P14-201 | ENST00000412459 | 517 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC005009.1-201 | ENST00000423979 | 269 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC004870.4-201 | ENST00000424359 | 360 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | F10-AS1-201 | ENST00000424635 | 417 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC005517.2-201 | ENST00000424673 | 553 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | CYCSP4-201 | ENST00000429682 | 331 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL160411.1-201 | ENST00000429853 | 400 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | IGKV1OR9-2-201 | ENST00000431378 | 277 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | PCYT1B-AS1-201 | ENST00000432626 | 275 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | C4orf26-202 | ENST00000435974 | 560 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SDCBPP1-201 | ENST00000440192 | 890 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC092641.1-201 | ENST00000440229 | 772 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | LINC01317-202 | ENST00000442026 | 677 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RPL21P23-201 | ENST00000446654 | 460 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL590365.1-201 | ENST00000450788 | 243 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | DNM3-IT1-201 | ENST00000450800 | 396 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ANP32BP2-201 | ENST00000454525 | 545 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORD42A-201 | ENST00000459584 | 64 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | GPX5-203 | ENST00000469384 | 428 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC104563.1-201 | ENST00000476147 | 376 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RN7SL293P-201 | ENST00000481765 | 281 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | TRBV12-2-201 | ENST00000489763 | 344 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC138057.1-201 | ENST00000497258 | 696 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | LINC02379-201 | ENST00000505741 | 300 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC107398.2-201 | ENST00000508081 | 601 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC010261.1-201 | ENST00000514411 | 457 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORA70.14-201 | ENST00000516205 | 110 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RNU6-405P-201 | ENST00000516637 | 110 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC022360.2-201 | ENST00000522390 | 456 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MTCYBP20-201 | ENST00000524239 | 1129 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ZDHHC20P3-201 | ENST00000531576 | 336 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL354920.1-202 | ENST00000531661 | 1017 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC136188.1-201 | ENST00000546770 | 342 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MIR4528-201 | ENST00000577763 | 90 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC044873.1-201 | ENST00000580487 | 399 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | CCDC178-211 | ENST00000581852 | 876 nt | APPRIS ALT2 TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MIR3922-201 | ENST00000585192 | 84 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ZNF573-209 | ENST00000585724 | 453 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | DEFB131E-202 | ENST00000602581 | 683 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC080078.2-201 | ENST00000603766 | 501 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL034351.1-201 | ENST00000605288 | 668 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC091965.4-201 | ENST00000607691 | 587 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC015540.1-201 | ENST00000615828 | 501 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC084757.4-201 | ENST00000616350 | 526 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC243312.2-201 | ENST00000623340 | 601 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC010976.1-210 | ENST00000630740 | 1005 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MYOT-202 | ENST00000421631 | 1474 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL049781.1-201 | ENST00000623195 | 3585 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC005550.3-201 | ENST00000451240 | 3743 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | TMEM67-202 | ENST00000409623 | 3255 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | LINC01828-203 | ENST00000452716 | 3250 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | ZFAND6-212 | ENST00000559775 | 1602 nt | APPRIS P1 TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MTND5P29-201 | ENST00000458676 | 1807 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | FER-201 | ENST00000281092 | 12119 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | CALCRL-203 | ENST00000410068 | 1984 nt | APPRIS P1 TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RTN4-208 | ENST00000404909 | 4102 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | LINC02493-201 | ENST00000509964 | 1704 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | C12orf4-201 | ENST00000261250 | 3826 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | C6orf10-205 | ENST00000527965 | 2076 nt | APPRIS ALT2 TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SLCO1B1-201 | ENST00000256958 | 2229 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AC066616.2-201 | ENST00000559334 | 1481 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | AL033397.1-201 | ENST00000502390 | 3653 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MIR208A-201 | ENST00000362287 | 71 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORD9-201 | ENST00000362566 | 104 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | Y_RNA.41-201 | ENST00000362646 | 102 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORD46.1-201 | ENST00000364139 | 104 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORA70.4-201 | ENST00000365509 | 134 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | C1orf189-201 | ENST00000368525 | 387 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | Y_RNA.548-201 | ENST00000384656 | 105 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | MIR183-201 | ENST00000384958 | 110 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | SNORA40.3-201 | ENST00000390964 | 122 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX8 | Q06710 | RNU2-66P-201 | ENST00000410650 | 161 nt | BASIC | 2.99 | □□□□□ -1.93 | | |