Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MIR6130-201ENST00000619419 109 ntBASIC3.98□□□□□ -1.77
UBE3AQ05086 AC009268.2-201ENST00000621925 457 ntBASIC3.98□□□□□ -1.77
UBE3AQ05086 AC048347.1-201ENST00000624621 427 ntBASIC3.98□□□□□ -1.77
UBE3AQ05086 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UBE3AQ05086 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.98□□□□□ -1.77
UBE3AQ05086 TAB3P1-202ENST00000452645 1634 ntBASIC3.98□□□□□ -1.77
UBE3AQ05086 MTND5P33-201ENST00000571250 1450 ntBASIC3.98□□□□□ -1.77
UBE3AQ05086 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBE3AQ05086 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.97□□□□□ -1.77
UBE3AQ05086 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 HSPE1P26-201ENST00000405341 275 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.97□□□□□ -1.77
UBE3AQ05086 AC244035.1-201ENST00000430042 390 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 CYCSP32-201ENST00000440548 321 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC118469.1-201ENST00000442943 488 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 COX6CP12-201ENST00000446748 202 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC006480.1-201ENST00000449887 378 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.97□□□□□ -1.77
UBE3AQ05086 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 HSPD1P15-201ENST00000505573 1122 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 GMPSP1-201ENST00000514075 579 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.97□□□□□ -1.77
UBE3AQ05086 RN7SKP289-201ENST00000517244 295 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
UBE3AQ05086 HIGD1AP10-201ENST00000527837 282 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC103843.2-201ENST00000530523 682 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 AC009101.1-201ENST00000568135 242 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC020914.4-201ENST00000597690 277 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 U73023.1-201ENST00000603134 700 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AC012443.1-201ENST00000605605 231 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3AQ05086 AC027807.2-201ENST00000616099 408 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 MIR3651-201ENST00000630427 90 ntBASIC3.97□□□□□ -1.77
UBE3AQ05086 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.97□□□□□ -1.77
UBE3AQ05086 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.97□□□□□ -1.77
UBE3AQ05086 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
UBE3AQ05086 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3AQ05086 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.97□□□□□ -1.77
UBE3AQ05086 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
UBE3AQ05086 AC018555.1-201ENST00000567548 1980 ntBASIC3.96□□□□□ -1.77
UBE3AQ05086 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 RNU4-21P-201ENST00000362802 126 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 RNU6-637P-201ENST00000384050 107 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UBE3AQ05086 RPS3AP24-201ENST00000407896 734 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 SNORA11.2-201ENST00000408318 127 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3AQ05086 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.96□□□□□ -1.78
UBE3AQ05086 AC098826.1-201ENST00000433943 471 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3AQ05086 TRIM60P18-201ENST00000441518 828 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC009961.3-201ENST00000449832 765 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 RN7SL807P-201ENST00000470923 297 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UBE3AQ05086 RPL7P24-201ENST00000493052 752 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
UBE3AQ05086 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
UBE3AQ05086 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3AQ05086 MIR2114-201ENST00000516645 80 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.96□□□□□ -1.78
UBE3AQ05086 ACTR3BP3-201ENST00000565577 979 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3AQ05086 MIR4644-201ENST00000579929 84 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC011471.1-201ENST00000585766 187 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC005000.2-201ENST00000605468 310 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3AQ05086 AL450472.3-201ENST00000615578 367 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AL355365.1-201ENST00000616480 294 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 AC119674.1-207ENST00000641355 633 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 GABPAP-201ENST00000419271 1356 ntBASIC3.96□□□□□ -1.78
UBE3AQ05086 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3AQ05086 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3AQ05086 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3AQ05086 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3AQ05086 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
UBE3AQ05086 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBE3AQ05086 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
UBE3AQ05086 MTND4P4-201ENST00000439033 1366 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 RNU6-50P-201ENST00000362356 103 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 RNU6-533P-201ENST00000384144 107 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 RNA5SP424-201ENST00000390988 115 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 RNU6-516P-201ENST00000411381 104 ntBASIC3.95□□□□□ -1.78
UBE3AQ05086 MTND1P21-201ENST00000412991 285 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms