Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 AC090132.2-201ENST00000615881 347 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 AC008443.7-201ENST00000622195 246 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 OR5BR1P-201ENST00000524992 1330 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 AC008264.2-201ENST00000610193 3731 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
UBXN1Q04323 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
UBXN1Q04323 RNU6-952P-201ENST00000391164 108 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.35□□□□□ -1.87
UBXN1Q04323 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBXN1Q04323 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.35□□□□□ -1.87
UBXN1Q04323 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.35□□□□□ -1.87
UBXN1Q04323 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
UBXN1Q04323 AC244505.4-201ENST00000434905 287 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 SSXP5-201ENST00000443473 287 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
UBXN1Q04323 RPS29P12-201ENST00000460178 152 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 RPL31P50-201ENST00000471002 296 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 FAM172BP-201ENST00000487497 1089 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 RN7SL633P-201ENST00000488974 297 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 PRELID3BP6-201ENST00000503839 571 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.35□□□□□ -1.87
UBXN1Q04323 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
UBXN1Q04323 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
UBXN1Q04323 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 OR6C7P-201ENST00000547875 934 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 HMGB1P14-201ENST00000557424 591 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.35□□□□□ -1.87
UBXN1Q04323 AC079089.3-201ENST00000603094 673 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 AC024933.1-201ENST00000608472 348 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBXN1Q04323 SDAD1P2-201ENST00000441308 2028 ntBASIC3.35□□□□□ -1.87
UBXN1Q04323 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBXN1Q04323 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
UBXN1Q04323 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBXN1Q04323 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBXN1Q04323 RNA5SP139-201ENST00000364340 117 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 RNU6-621P-201ENST00000364752 109 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 MIR200C-201ENST00000384980 68 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBXN1Q04323 SNORD67-201ENST00000390833 111 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.34□□□□□ -1.87
UBXN1Q04323 NDUFB4P7-201ENST00000423198 363 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 PPP1R11P2-201ENST00000423543 382 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 NANOGP2-201ENST00000435391 727 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 TAAR7P-201ENST00000436141 242 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC009237.8-201ENST00000445492 379 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC002381.1-201ENST00000447049 280 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AL049874.1-201ENST00000489560 388 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.34□□□□□ -1.87
UBXN1Q04323 AC147055.4-201ENST00000504399 745 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC118282.1-201ENST00000506408 765 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC119751.4-201ENST00000507498 357 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 MTATP6P9-201ENST00000515039 680 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 RNU6-714P-201ENST00000516963 103 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
UBXN1Q04323 COX6CP8-201ENST00000522620 226 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.34□□□□□ -1.87
UBXN1Q04323 DEFB131D-201ENST00000526803 184 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.34□□□□□ -1.87
UBXN1Q04323 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.34□□□□□ -1.87
UBXN1Q04323 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.34□□□□□ -1.87
UBXN1Q04323 CYCSP2-201ENST00000558168 301 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 OR4K7P-201ENST00000580232 945 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AL133507.1-201ENST00000605269 557 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AL158211.4-201ENST00000606988 584 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AL121652.1-201ENST00000608851 448 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AC138932.5-201ENST00000617759 563 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 AL445984.1-201ENST00000637834 659 ntBASIC3.34□□□□□ -1.87
UBXN1Q04323 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
UBXN1Q04323 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBXN1Q04323 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBXN1Q04323 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBXN1Q04323 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.88
UBXN1Q04323 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
UBXN1Q04323 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
UBXN1Q04323 RNU6-359P-201ENST00000365466 108 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 Y_RNA.548-201ENST00000384656 105 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UBXN1Q04323 TAF9BP1-201ENST00000396646 746 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 RPL23AP29-201ENST00000397284 453 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 VN1R51P-201ENST00000411675 945 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
UBXN1Q04323 AC097713.2-201ENST00000430199 356 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.33□□□□□ -1.88
UBXN1Q04323 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
UBXN1Q04323 Z75741.1-201ENST00000446793 314 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 AC016696.1-201ENST00000446949 318 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.33□□□□□ -1.88
UBXN1Q04323 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.33□□□□□ -1.88
UBXN1Q04323 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.33□□□□□ -1.88
UBXN1Q04323 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.33□□□□□ -1.88
UBXN1Q04323 SNORD121B-201ENST00000458838 81 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 MTND1P16-201ENST00000465177 898 ntBASIC3.33□□□□□ -1.88
UBXN1Q04323 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms