Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HIST1H3AP68431 MYL12BP1-201ENST00000569826 507 ntBASIC2.12□□□□□ -2.07
HIST1H3AP68431 MIR4658-201ENST00000584344 65 ntBASIC2.12□□□□□ -2.07
HIST1H3AP68431 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.12□□□□□ -2.07
HIST1H3AP68431 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.12□□□□□ -2.07
HIST1H3AP68431 AP003485.2-201ENST00000623636 610 ntBASIC2.12□□□□□ -2.07
HIST1H3AP68431 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.12□□□□□ -2.07
HIST1H3AP68431 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.12□□□□□ -2.07
HIST1H3AP68431 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HIST1H3AP68431 AC130650.2-201ENST00000618736 2403 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HIST1H3AP68431 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 FRG1BP-201ENST00000278882 761 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 SNORD82-201ENST00000365530 70 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AL136372.1-201ENST00000403060 228 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 MTND4LP10-201ENST00000435146 291 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC104389.3-201ENST00000445629 235 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 snoU13.28-201ENST00000459235 104 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 RPL31P41-201ENST00000477967 372 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 RNA5SP148-201ENST00000516527 94 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 CASP1P1-201ENST00000526345 212 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC004217.3-201ENST00000551552 878 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 PRELID2P1-201ENST00000552837 301 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 ACTR3BP3-201ENST00000565577 979 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC061975.8-201ENST00000587058 721 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC012443.1-201ENST00000605605 231 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC021851.1-201ENST00000608537 1082 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 AC025588.4-201ENST00000615802 908 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 MFSD8-245ENST00000641743 948 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H3AP68431 SEC63P2-201ENST00000503863 1939 ntBASIC2.11□□□□□ -2.07
HIST1H3AP68431 ZNF90P1-201ENST00000480493 1951 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 RNU1-105P-201ENST00000363470 161 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 RNU6-461P-201ENST00000364195 107 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 RNU6-1072P-201ENST00000384703 107 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 RNU6-443P-201ENST00000384780 107 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC007064.1-201ENST00000412238 351 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 OR4K11P-201ENST00000431829 904 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AL445687.1-201ENST00000439946 251 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 BX248409.1-201ENST00000455497 255 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 OR52A4P-202ENST00000481634 799 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 OR52A4P-203ENST00000498233 1014 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC104108.1-201ENST00000509930 412 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 LSM6P2-201ENST00000552208 177 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 NRBF2P5-201ENST00000603087 788 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 RPL23AP92-201ENST00000603609 255 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AL645944.1-201ENST00000603857 493 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AP004247.3-201ENST00000608682 624 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AL137847.3-201ENST00000611521 109 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
HIST1H3AP68431 AL359693.1-201ENST00000614959 2407 ntBASIC2.1□□□□□ -2.07
HIST1H3AP68431 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
HIST1H3AP68431 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HIST1H3AP68431 AL139276.1-201ENST00000311910 1001 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 SNORA5B-201ENST00000363786 132 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HIST1H3AP68431 RNU6-40P-201ENST00000384254 107 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 MIR767-201ENST00000390228 109 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 NDUFB4P4-201ENST00000404822 243 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 AC135721.1-201ENST00000497954 479 ntBASIC2.09□□□□□ -2.07
HIST1H3AP68431 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H3AP68431 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms