Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC114781.4-201ENST00000513707 639 ntBASIC3.06□□□□□ -1.92
LMO4P61968 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 RNA5SP216-201ENST00000516111 123 ntBASIC3.06□□□□□ -1.92
LMO4P61968 MYL12AP1-201ENST00000518490 515 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 SUMO2P20-201ENST00000520803 283 ntBASIC3.06□□□□□ -1.92
LMO4P61968 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO4P61968 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO4P61968 AC007424.1-203ENST00000554613 687 ntBASIC3.06□□□□□ -1.92
LMO4P61968 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO4P61968 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
LMO4P61968 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AC006504.3-201ENST00000586818 523 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC010928.3-201ENST00000587712 541 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AL669831.4-202ENST00000590817 238 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 BNIP3P8-201ENST00000597863 560 ntBASIC3.06□□□□□ -1.92
LMO4P61968 SRGNP1-201ENST00000603392 451 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC010591.1-201ENST00000603941 649 ntBASIC3.06□□□□□ -1.92
LMO4P61968 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.06□□□□□ -1.92
LMO4P61968 AC008250.2-201ENST00000615261 205 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC009318.4-201ENST00000620496 486 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AL357559.1-201ENST00000622228 274 ntBASIC3.06□□□□□ -1.92
LMO4P61968 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 AC093591.3-201ENST00000634516 308 ntBASIC3.06□□□□□ -1.92
LMO4P61968 U6.105-201ENST00000637379 88 ntBASIC3.06□□□□□ -1.92
LMO4P61968 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 MFSD8-236ENST00000641509 4050 ntBASIC3.05□□□□□ -1.92
LMO4P61968 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 OR4G11P-202ENST00000642116 1414 ntBASIC3.05□□□□□ -1.92
LMO4P61968 SNORD9-201ENST00000362566 104 ntBASIC3.05□□□□□ -1.92
LMO4P61968 Y_RNA.70-201ENST00000362886 110 ntBASIC3.05□□□□□ -1.92
LMO4P61968 RNU6-263P-201ENST00000363811 107 ntBASIC3.05□□□□□ -1.92
LMO4P61968 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LMO4P61968 RNU6-657P-201ENST00000383904 107 ntBASIC3.05□□□□□ -1.92
LMO4P61968 Y_RNA.450-201ENST00000384198 113 ntBASIC3.05□□□□□ -1.92
LMO4P61968 RNU6-114P-201ENST00000384704 105 ntBASIC3.05□□□□□ -1.92
LMO4P61968 MIR34B-201ENST00000385076 84 ntBASIC3.05□□□□□ -1.92
LMO4P61968 HLFP1-201ENST00000402375 499 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AL024474.1-201ENST00000404655 591 ntBASIC3.05□□□□□ -1.92
LMO4P61968 SNORA11.1-201ENST00000408133 129 ntBASIC3.05□□□□□ -1.92
LMO4P61968 Y_RNA.598-201ENST00000410480 95 ntBASIC3.05□□□□□ -1.92
LMO4P61968 RNA5SP306-201ENST00000411087 107 ntBASIC3.05□□□□□ -1.92
LMO4P61968 EI24P1-201ENST00000416584 867 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 AC083875.1-201ENST00000419509 405 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO4P61968 AC007742.1-201ENST00000425789 329 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC087650.1-201ENST00000431445 468 ntBASIC3.05□□□□□ -1.92
LMO4P61968 MTND3P23-201ENST00000431980 347 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 ELOCP26-201ENST00000436067 329 ntBASIC3.05□□□□□ -1.92
LMO4P61968 UBE2V1P7-201ENST00000446395 340 ntBASIC3.05□□□□□ -1.92
LMO4P61968 USP9YP12-201ENST00000450481 570 ntBASIC3.05□□□□□ -1.92
LMO4P61968 PRSS3P4-201ENST00000453323 162 ntBASIC3.05□□□□□ -1.92
LMO4P61968 MEMO1P3-201ENST00000459811 302 ntBASIC3.05□□□□□ -1.92
LMO4P61968 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO4P61968 AC117522.1-201ENST00000509821 380 ntBASIC3.05□□□□□ -1.92
LMO4P61968 RN7SKP13-201ENST00000515933 244 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 RANP9-201ENST00000519957 271 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AP001646.1-201ENST00000527936 915 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AP004242.1-201ENST00000533701 349 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.05□□□□□ -1.92
LMO4P61968 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO4P61968 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO4P61968 AC006270.2-201ENST00000578523 652 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO4P61968 PRELID3BP8-201ENST00000604148 295 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AL161729.4-201ENST00000604650 476 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC012468.1-201ENST00000604888 430 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC104458.1-201ENST00000608243 463 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AP001521.1-201ENST00000609150 300 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC015813.4-201ENST00000610469 179 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AC104010.1-201ENST00000616889 150 ntBASIC3.05□□□□□ -1.92
LMO4P61968 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.05□□□□□ -1.92
LMO4P61968 AL158209.2-201ENST00000619266 216 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms