Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RPL31P50-201ENST00000471002 296 ntBASIC3.21□□□□□ -1.9
SRP54P61011 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SRP54P61011 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.21□□□□□ -1.9
SRP54P61011 RPS3AP43-201ENST00000479743 781 ntBASIC3.21□□□□□ -1.9
SRP54P61011 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.21□□□□□ -1.9
SRP54P61011 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.21□□□□□ -1.9
SRP54P61011 AC017037.2-201ENST00000513850 890 ntBASIC3.21□□□□□ -1.9
SRP54P61011 SCARNA1-201ENST00000517138 166 ntBASIC3.21□□□□□ -1.9
SRP54P61011 DEFB108D-201ENST00000527787 222 ntBASIC3.21□□□□□ -1.9
SRP54P61011 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.21□□□□□ -1.9
SRP54P61011 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.21□□□□□ -1.9
SRP54P61011 CYCSP2-201ENST00000558168 301 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AC090695.1-201ENST00000561269 1222 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MIR3921-201ENST00000577308 85 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.21□□□□□ -1.9
SRP54P61011 AL133393.1-201ENST00000603277 287 ntBASIC3.21□□□□□ -1.9
SRP54P61011 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.21□□□□□ -1.9
SRP54P61011 DUXAP10-204ENST00000612052 616 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AC006111.3-201ENST00000622137 383 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.21□□□□□ -1.9
SRP54P61011 DDX43P2-201ENST00000604753 1354 ntBASIC3.21□□□□□ -1.9
SRP54P61011 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRP54P61011 ZNF833P-201ENST00000424938 1494 ntBASIC3.21□□□□□ -1.9
SRP54P61011 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.9
SRP54P61011 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP54P61011 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP54P61011 Y_RNA.234-201ENST00000364409 97 ntBASIC3.2□□□□□ -1.9
SRP54P61011 SNORA48.5-201ENST00000391143 135 ntBASIC3.2□□□□□ -1.9
SRP54P61011 RNU6-952P-201ENST00000391164 108 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.2□□□□□ -1.9
SRP54P61011 AL953862.1-201ENST00000423016 168 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP54P61011 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 SETP8-201ENST00000435341 628 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP54P61011 AL671855.1-201ENST00000446875 1203 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC092155.2-201ENST00000454675 477 ntBASIC3.2□□□□□ -1.9
SRP54P61011 snoU13.8-201ENST00000458890 104 ntBASIC3.2□□□□□ -1.9
SRP54P61011 RPL21P8-201ENST00000465083 535 ntBASIC3.2□□□□□ -1.9
SRP54P61011 FAM172BP-201ENST00000487497 1089 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC020893.1-201ENST00000502452 580 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP54P61011 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 AC116353.3-201ENST00000511215 249 ntBASIC3.2□□□□□ -1.9
SRP54P61011 RN7SKP282-201ENST00000516824 299 ntBASIC3.2□□□□□ -1.9
SRP54P61011 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
SRP54P61011 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SRP54P61011 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SRP54P61011 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP54P61011 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP54P61011 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP54P61011 MIR6130-201ENST00000619419 109 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AC026422.1-201ENST00000623961 452 ntBASIC3.2□□□□□ -1.9
SRP54P61011 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.2□□□□□ -1.9
SRP54P61011 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP54P61011 AC116618.1-201ENST00000634617 774 ntBASIC3.2□□□□□ -1.9
SRP54P61011 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.2□□□□□ -1.9
SRP54P61011 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP54P61011 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP54P61011 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
SRP54P61011 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP54P61011 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SRP54P61011 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP54P61011 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
SRP54P61011 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP54P61011 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
SRP54P61011 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
SRP54P61011 SAR1AP2-201ENST00000392696 594 ntBASIC3.19□□□□□ -1.9
SRP54P61011 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
SRP54P61011 RPS3AP24-201ENST00000407896 734 ntBASIC3.19□□□□□ -1.9
SRP54P61011 MIR1290-201ENST00000408735 78 ntBASIC3.19□□□□□ -1.9
SRP54P61011 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 BX890604.2-201ENST00000427883 474 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC004854.1-201ENST00000440356 349 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP54P61011 RPL36AP33-201ENST00000450395 310 ntBASIC3.19□□□□□ -1.9
SRP54P61011 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP54P61011 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
SRP54P61011 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 KCTD9P5-201ENST00000504141 1170 ntBASIC3.19□□□□□ -1.9
SRP54P61011 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP54P61011 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP54P61011 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
SRP54P61011 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP54P61011 COX6CP8-201ENST00000522620 226 ntBASIC3.19□□□□□ -1.9
SRP54P61011 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP54P61011 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.19□□□□□ -1.9
SRP54P61011 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.19□□□□□ -1.9
SRP54P61011 OR6C7P-201ENST00000547875 934 ntBASIC3.19□□□□□ -1.9
SRP54P61011 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms