Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD4P46934 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD4P46934 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD4P46934 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD4P46934 SNORD108-201ENST00000459332 71 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC068587.2-201ENST00000478386 781 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 OR5H5P-201ENST00000503164 928 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC021146.8-201ENST00000507455 733 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD4P46934 IGKV2D-36-201ENST00000518643 226 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 MTATP6P15-201ENST00000527233 835 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 DUXAP5-201ENST00000529668 529 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NEDD4P46934 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD4P46934 AC002400.1-201ENST00000569310 726 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD4P46934 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.41□□□□□ -1.86
NEDD4P46934 AC083899.3-201ENST00000603413 594 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC025588.3-201ENST00000604182 274 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC112220.3-201ENST00000605502 502 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC103710.3-201ENST00000608157 948 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 AC090116.1-201ENST00000615679 446 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 U73479.1-201ENST00000618062 168 ntBASIC3.41□□□□□ -1.86
NEDD4P46934 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NEDD4P46934 MTCO1P14-201ENST00000441695 1559 ntBASIC3.4□□□□□ -1.86
NEDD4P46934 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD4P46934 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.4□□□□□ -1.86
NEDD4P46934 AC096644.4-201ENST00000563417 2912 ntBASIC3.4□□□□□ -1.86
NEDD4P46934 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.86
NEDD4P46934 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD4P46934 AL079305.1-201ENST00000623159 3008 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD4P46934 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
NEDD4P46934 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 RSL24D1P4-201ENST00000400938 484 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 HMGB1P17-201ENST00000403495 628 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AL590004.2-201ENST00000404787 371 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 RN7SKP58-201ENST00000411010 305 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD4P46934 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD4P46934 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD4P46934 AL592148.1-201ENST00000413568 445 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD4P46934 AIMP1P1-201ENST00000418670 937 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 MTCYBP34-201ENST00000439552 670 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 USP9YP34-201ENST00000453983 808 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD4P46934 AC026410.2-201ENST00000460281 156 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC012170.1-201ENST00000495139 359 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 MTCYBP17-201ENST00000503579 789 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC083906.5-201ENST00000503722 328 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 XKRY-201ENST00000510392 1100 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD4P46934 SCGB1D5P-201ENST00000515134 247 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC104986.1-201ENST00000517978 436 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 UBTFL10-201ENST00000528532 562 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 ZNF321P-202ENST00000550843 495 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD4P46934 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 AC034105.3-201ENST00000565294 442 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC106782.4-201ENST00000568264 210 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 VN1R92P-201ENST00000598511 928 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD4P46934 AC073968.1-201ENST00000618594 637 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC006065.5-201ENST00000623427 349 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC231657.1-201ENST00000624313 397 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 AC009039.2-201ENST00000624524 529 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD4P46934 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD4P46934 MTCO1P23-201ENST00000415223 1526 ntBASIC3.4□□□□□ -1.87
NEDD4P46934 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD4P46934 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD4P46934 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD4P46934 ASNSP3-201ENST00000451989 1306 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 RNU6-374P-201ENST00000364146 108 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 RNU6-878P-201ENST00000384578 110 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 NDUFB4P4-201ENST00000404822 243 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 USP9YP33-201ENST00000412220 421 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 NDUFB4P5-201ENST00000415445 361 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 MTCYBP38-201ENST00000417160 1123 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AL035410.1-201ENST00000427409 427 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD4P46934 USP9YP35-201ENST00000435696 412 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC107083.1-201ENST00000439643 279 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 MTND1P31-201ENST00000449206 961 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 USP9YP10-201ENST00000454868 628 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 AC097493.1-201ENST00000463958 372 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 RPS15AP17-201ENST00000470598 390 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC090453.1-201ENST00000495560 436 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 HIGD1AP13-201ENST00000509878 289 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms