Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNA5SP183-201ENST00000362452 119 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 SNORA51.6-201ENST00000384151 125 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AL136372.1-201ENST00000403060 228 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 RPL30P2-201ENST00000414021 291 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA4P43681 RPL23AP25-201ENST00000430973 463 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AL353597.2-202ENST00000434901 373 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 CEACAMP6-201ENST00000452007 574 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA4P43681 MRPL42P6-201ENST00000486397 371 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 RPS27P26-201ENST00000494583 239 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA4P43681 SNORA31.18-201ENST00000517043 134 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA4P43681 AC012339.2-201ENST00000523996 453 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA4P43681 AC004024.1-201ENST00000549244 247 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 MIR3144-201ENST00000579460 79 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.3□□□□□ -1.56
CHRNA4P43681 AC072026.1-201ENST00000605023 201 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.3□□□□□ -1.56
CHRNA4P43681 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.3□□□□□ -1.56
CHRNA4P43681 AP005432.1-201ENST00000580891 3485 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 CASC19-204ENST00000641001 2055 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AL138713.1-201ENST00000624026 2130 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AC093671.1-201ENST00000624981 2929 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 THAP12P4-201ENST00000528321 2266 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC092747.4-201ENST00000620519 1861 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 RNU6-249P-201ENST00000363016 102 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 snoU2_19.2-201ENST00000363024 80 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 Y_RNA.234-201ENST00000364409 97 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RNU6-153P-201ENST00000364422 104 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 RNU6-804P-201ENST00000384286 107 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RNU6-921P-201ENST00000384361 107 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 SNORA16.2-201ENST00000390991 127 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC016769.3-201ENST00000396562 315 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AL391361.1-201ENST00000405580 489 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC114491.1-201ENST00000416095 246 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RPL21P109-201ENST00000422213 475 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 FAR2P4-202ENST00000425399 584 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CHRNA4P43681 RPL23AP31-201ENST00000456160 467 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC022133.1-201ENST00000490961 571 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC110792.1-201ENST00000491826 472 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 ATP5LP3-201ENST00000514223 304 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 SERF1AP1-201ENST00000514575 187 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 Y_RNA.662-201ENST00000516028 97 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RNU6-1338P-201ENST00000516328 91 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 SNORA72.7-201ENST00000516349 94 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 IGKV2-36-201ENST00000519999 223 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.29□□□□□ -1.56
CHRNA4P43681 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 MIR4643-201ENST00000577473 78 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 RN7SL708P-201ENST00000580952 299 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 PRPF19P1-201ENST00000584766 898 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AC069307.1-201ENST00000602820 447 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 IMMP1LP3-201ENST00000604197 224 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AL451044.1-201ENST00000604867 238 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA4P43681 AC006023.2-201ENST00000609916 167 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA4P43681 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA4P43681 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
CHRNA4P43681 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA4P43681 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA4P43681 AL121950.1-201ENST00000624993 2077 ntBASIC5.28□□□□□ -1.56
CHRNA4P43681 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA4P43681 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CHRNA4P43681 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA4P43681 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA4P43681 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CHRNA4P43681 RNU6-97P-201ENST00000363387 104 ntBASIC5.28□□□□□ -1.56
CHRNA4P43681 RN7SKP153-201ENST00000365026 316 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms