Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HIGD1AP11-201ENST00000438361 280 ntBASIC1.72□□□□□ -2.13
HTTP42858 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.72□□□□□ -2.13
HTTP42858 AC090255.1-201ENST00000495779 349 ntBASIC1.72□□□□□ -2.13
HTTP42858 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.72□□□□□ -2.13
HTTP42858 AGGF1P8-201ENST00000562979 1000 ntBASIC1.72□□□□□ -2.13
HTTP42858 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HTTP42858 MTCO1P6-201ENST00000481192 1384 ntBASIC1.72□□□□□ -2.13
HTTP42858 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HTTP42858 AC092447.7-201ENST00000422212 1621 ntBASIC1.72□□□□□ -2.13
HTTP42858 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.72□□□□□ -2.13
HTTP42858 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.72□□□□□ -2.13
HTTP42858 ZNF542P-204ENST00000482727 1305 ntBASIC1.72□□□□□ -2.13
HTTP42858 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HTTP42858 HMGN2P18-201ENST00000450680 270 ntBASIC1.71□□□□□ -2.14
HTTP42858 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HTTP42858 MIR1273G-201ENST00000577677 100 ntBASIC1.71□□□□□ -2.14
HTTP42858 RN7SL793P-201ENST00000583259 296 ntBASIC1.71□□□□□ -2.14
HTTP42858 Y_RNA.393-201ENST00000383936 102 ntBASIC1.71□□□□□ -2.14
HTTP42858 RPL34P26-201ENST00000445636 354 ntBASIC1.71□□□□□ -2.14
HTTP42858 AL157827.1-201ENST00000447622 132 ntBASIC1.71□□□□□ -2.14
HTTP42858 AC108078.1-201ENST00000508073 725 ntBASIC1.71□□□□□ -2.14
HTTP42858 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.71□□□□□ -2.14
HTTP42858 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.71□□□□□ -2.14
HTTP42858 AC109446.2-201ENST00000567872 497 ntBASIC1.71□□□□□ -2.14
HTTP42858 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.71□□□□□ -2.14
HTTP42858 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
HTTP42858 RNA5SP457-201ENST00000363657 124 ntBASIC1.71□□□□□ -2.14
HTTP42858 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HTTP42858 HSPD1P16-201ENST00000402302 394 ntBASIC1.71□□□□□ -2.14
HTTP42858 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.71□□□□□ -2.14
HTTP42858 AC004223.1-201ENST00000479840 271 ntBASIC1.71□□□□□ -2.14
HTTP42858 AC079203.1-201ENST00000487972 404 ntBASIC1.71□□□□□ -2.14
HTTP42858 RNA5SP337-201ENST00000517007 109 ntBASIC1.71□□□□□ -2.14
HTTP42858 AL121821.2-201ENST00000556081 394 ntBASIC1.71□□□□□ -2.14
HTTP42858 AL845331.3-202ENST00000562856 261 ntBASIC1.71□□□□□ -2.14
HTTP42858 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.71□□□□□ -2.14
HTTP42858 AC034102.8-201ENST00000615146 484 ntBASIC1.71□□□□□ -2.14
HTTP42858 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
HTTP42858 SNORD114-27-201ENST00000363766 70 ntBASIC1.7□□□□□ -2.14
HTTP42858 BTBD10P2-201ENST00000404779 676 ntBASIC1.7□□□□□ -2.14
HTTP42858 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.7□□□□□ -2.14
HTTP42858 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.7□□□□□ -2.14
HTTP42858 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.7□□□□□ -2.14
HTTP42858 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HTTP42858 RNA5SP257-201ENST00000363023 116 ntBASIC1.7□□□□□ -2.14
HTTP42858 MIR520E-201ENST00000384867 87 ntBASIC1.7□□□□□ -2.14
HTTP42858 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.7□□□□□ -2.14
HTTP42858 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
HTTP42858 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.7□□□□□ -2.14
HTTP42858 SEPT7P3-201ENST00000455017 621 ntBASIC1.7□□□□□ -2.14
HTTP42858 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
HTTP42858 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.69□□□□□ -2.14
HTTP42858 FNDC3CP-201ENST00000420795 1155 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.69□□□□□ -2.14
HTTP42858 AC073310.1-201ENST00000423226 1033 ntBASIC1.69□□□□□ -2.14
HTTP42858 TPT1P14-201ENST00000448018 505 ntBASIC1.69□□□□□ -2.14
HTTP42858 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.69□□□□□ -2.14
HTTP42858 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HTTP42858 AC243773.3-201ENST00000613270 256 ntBASIC1.69□□□□□ -2.14
HTTP42858 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HTTP42858 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
HTTP42858 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HTTP42858 DEFB109C-201ENST00000382575 264 ntBASIC1.69□□□□□ -2.14
HTTP42858 DEFB109B-201ENST00000382656 264 ntBASIC1.69□□□□□ -2.14
HTTP42858 IPMKP1-201ENST00000425988 855 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.69□□□□□ -2.14
HTTP42858 AC092159.4-201ENST00000624944 550 ntBASIC1.69□□□□□ -2.14
HTTP42858 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HTTP42858 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.69□□□□□ -2.14
HTTP42858 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HTTP42858 AC093775.1-201ENST00000624154 1868 ntBASIC1.69□□□□□ -2.14
HTTP42858 RNU4-51P-201ENST00000364206 140 ntBASIC1.69□□□□□ -2.14
HTTP42858 RNA5SP139-201ENST00000364340 117 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC005517.2-201ENST00000424673 553 ntBASIC1.69□□□□□ -2.14
HTTP42858 HMGB1P26-201ENST00000452520 628 ntBASIC1.69□□□□□ -2.14
HTTP42858 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.69□□□□□ -2.14
HTTP42858 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.69□□□□□ -2.14
HTTP42858 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HTTP42858 AC084851.1-201ENST00000529105 249 ntBASIC1.69□□□□□ -2.14
HTTP42858 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.68□□□□□ -2.14
HTTP42858 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 RPL39P40-201ENST00000445481 146 ntBASIC1.68□□□□□ -2.14
HTTP42858 RPL23AP44-201ENST00000482216 473 ntBASIC1.68□□□□□ -2.14
HTTP42858 MTCYBP18-201ENST00000501056 747 ntBASIC1.68□□□□□ -2.14
HTTP42858 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.68□□□□□ -2.14
HTTP42858 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.68□□□□□ -2.14
HTTP42858 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.68□□□□□ -2.14
HTTP42858 SNORA51.12-201ENST00000384448 134 ntBASIC1.68□□□□□ -2.14
HTTP42858 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
HTTP42858 TRIAP1P1-201ENST00000427062 225 ntBASIC1.68□□□□□ -2.14
HTTP42858 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.68□□□□□ -2.14
HTTP42858 EIF2S2P4-201ENST00000461070 984 ntBASIC1.68□□□□□ -2.14
HTTP42858 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
HTTP42858 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms