Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH3P22223 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.45□□□□□ -1.86
CDH3P22223 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 AP003355.3-201ENST00000623465 114 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AF246928.1-201ENST00000623768 87 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC004777.1-201ENST00000624317 287 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC092192.1-201ENST00000633154 1018 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH3P22223 MIR3974-201ENST00000637126 96 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC244258.1-201ENST00000637553 1071 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AL392088.2-201ENST00000637607 285 ntBASIC3.45□□□□□ -1.86
CDH3P22223 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH3P22223 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AL365440.1-201ENST00000436135 2167 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC103988.1-201ENST00000566382 2177 ntBASIC3.45□□□□□ -1.86
CDH3P22223 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
CDH3P22223 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH3P22223 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH3P22223 RNU1-75P-201ENST00000347264 129 ntBASIC3.44□□□□□ -1.86
CDH3P22223 Y_RNA.560-201ENST00000384689 102 ntBASIC3.44□□□□□ -1.86
CDH3P22223 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDH3P22223 AL136116.1-201ENST00000403591 381 ntBASIC3.44□□□□□ -1.86
CDH3P22223 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 AC245052.5-201ENST00000416320 649 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC068533.1-201ENST00000418542 415 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH3P22223 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 CYCSP4-201ENST00000429682 331 ntBASIC3.44□□□□□ -1.86
CDH3P22223 MTCYBP39-201ENST00000437562 491 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC092641.1-201ENST00000440229 772 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH3P22223 RPL30P9-201ENST00000465586 330 ntBASIC3.44□□□□□ -1.86
CDH3P22223 MTND3P7-201ENST00000474435 343 ntBASIC3.44□□□□□ -1.86
CDH3P22223 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
CDH3P22223 RPS3AP50-201ENST00000487064 803 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH3P22223 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH3P22223 AC010625.1-201ENST00000511296 403 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH3P22223 AC103843.2-201ENST00000530523 682 ntBASIC3.44□□□□□ -1.86
CDH3P22223 OR4P1P-201ENST00000530808 1136 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH3P22223 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH3P22223 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 BNIP3P22-201ENST00000593399 556 ntBASIC3.44□□□□□ -1.86
CDH3P22223 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 KLKP1-201ENST00000595979 403 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH3P22223 WISP1-OT1-201ENST00000602893 642 ntBASIC3.44□□□□□ -1.86
CDH3P22223 BBIP1P1-201ENST00000602999 279 ntBASIC3.44□□□□□ -1.86
CDH3P22223 Z99497.2-201ENST00000603634 310 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC121247.2-201ENST00000604776 136 ntBASIC3.44□□□□□ -1.86
CDH3P22223 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH3P22223 AC069200.1-201ENST00000609511 323 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC015967.1-201ENST00000619893 476 ntBASIC3.44□□□□□ -1.86
CDH3P22223 U4.6-201ENST00000621618 127 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AL732372.2-225ENST00000642124 456 ntBASIC3.44□□□□□ -1.86
CDH3P22223 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
CDH3P22223 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH3P22223 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 RNU6-28P-201ENST00000362378 107 ntBASIC3.43□□□□□ -1.86
CDH3P22223 RNA5SP258-201ENST00000362750 119 ntBASIC3.43□□□□□ -1.86
CDH3P22223 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
CDH3P22223 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 AL031577.2-201ENST00000404133 280 ntBASIC3.43□□□□□ -1.86
CDH3P22223 RPS15AP38-201ENST00000413110 372 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC092447.6-201ENST00000414578 210 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AC090960.1-201ENST00000421072 306 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 RPL21P40-201ENST00000428586 483 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AL158071.1-201ENST00000430315 461 ntBASIC3.43□□□□□ -1.86
CDH3P22223 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 LSM1P1-201ENST00000438629 273 ntBASIC3.43□□□□□ -1.86
CDH3P22223 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 RPL17P49-201ENST00000443728 411 ntBASIC3.43□□□□□ -1.86
CDH3P22223 MTND2P22-201ENST00000444325 1033 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 Z83846.1-201ENST00000446798 265 ntBASIC3.43□□□□□ -1.86
CDH3P22223 HMGB1P15-201ENST00000453854 435 ntBASIC3.43□□□□□ -1.86
CDH3P22223 snoU109.4-201ENST00000458953 143 ntBASIC3.43□□□□□ -1.86
CDH3P22223 SETP11-201ENST00000473027 690 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AC024589.1-201ENST00000512207 263 ntBASIC3.43□□□□□ -1.86
CDH3P22223 Y_RNA.688-201ENST00000516565 95 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms