Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC099654.2-201ENST00000433031 1980 ntBASIC5.47□□□□□ -1.53
LIG1P18858 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
LIG1P18858 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.47□□□□□ -1.53
LIG1P18858 ELL2P4-201ENST00000446870 1376 ntBASIC5.47□□□□□ -1.53
LIG1P18858 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LIG1P18858 Y_RNA.28-201ENST00000362554 111 ntBASIC5.47□□□□□ -1.53
LIG1P18858 MIR708-201ENST00000390708 88 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RN7SKP158-201ENST00000410453 326 ntBASIC5.47□□□□□ -1.53
LIG1P18858 OR6C66P-201ENST00000414917 930 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RPL7L1P10-201ENST00000427790 463 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AL772161.1-201ENST00000439130 476 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AL137792.2-201ENST00000443484 235 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RPL32P28-201ENST00000443577 397 ntBASIC5.47□□□□□ -1.53
LIG1P18858 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AC107399.1-201ENST00000451226 265 ntBASIC5.47□□□□□ -1.53
LIG1P18858 HMGB3P22-202ENST00000451823 572 ntBASIC5.47□□□□□ -1.53
LIG1P18858 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AC108059.3-201ENST00000456388 214 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RPS29P15-201ENST00000458329 171 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RNU7-180P-201ENST00000459240 63 ntBASIC5.47□□□□□ -1.53
LIG1P18858 RPL23AP56-201ENST00000460778 453 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AL136126.1-201ENST00000473603 402 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AC025164.1-201ENST00000496249 478 ntBASIC5.47□□□□□ -1.53
LIG1P18858 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 AC092436.1-201ENST00000506450 503 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AC021006.3-201ENST00000530771 192 ntBASIC5.47□□□□□ -1.53
LIG1P18858 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.47□□□□□ -1.53
LIG1P18858 MIR4504-201ENST00000577413 92 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AC209154.1-201ENST00000582156 337 ntBASIC5.47□□□□□ -1.53
LIG1P18858 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.47□□□□□ -1.53
LIG1P18858 AL592436.1-201ENST00000605135 558 ntBASIC5.47□□□□□ -1.53
LIG1P18858 uc_338.11-201ENST00000619132 160 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AC087385.3-201ENST00000620477 187 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AC091925.1-201ENST00000623204 462 ntBASIC5.47□□□□□ -1.53
LIG1P18858 AP001784.1-201ENST00000624107 428 ntBASIC5.47□□□□□ -1.53
LIG1P18858 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.47□□□□□ -1.53
LIG1P18858 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LIG1P18858 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIG1P18858 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
LIG1P18858 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.46□□□□□ -1.53
LIG1P18858 MTND5P28-201ENST00000438005 1594 ntBASIC5.46□□□□□ -1.53
LIG1P18858 AC007823.1-201ENST00000569932 1566 ntBASIC5.46□□□□□ -1.53
LIG1P18858 AL136964.1-201ENST00000622038 2990 ntBASIC5.46□□□□□ -1.53
LIG1P18858 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
LIG1P18858 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.46□□□□□ -1.53
LIG1P18858 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.46□□□□□ -1.53
LIG1P18858 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LIG1P18858 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-1309P-201ENST00000363305 108 ntBASIC5.46□□□□□ -1.54
LIG1P18858 U3.15-201ENST00000365398 212 ntBASIC5.46□□□□□ -1.54
LIG1P18858 Y_RNA.401-201ENST00000383965 117 ntBASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-1293P-201ENST00000384077 107 ntBASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-574P-201ENST00000384265 107 ntBASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-331P-201ENST00000384724 107 ntBASIC5.46□□□□□ -1.54
LIG1P18858 MIR19A-201ENST00000384878 82 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AL121834.1-202ENST00000404494 277 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AL080315.1-201ENST00000406055 466 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC074085.1-201ENST00000413598 418 ntBASIC5.46□□□□□ -1.54
LIG1P18858 SNRPEP4-201ENST00000435815 279 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 FTH1P1-201ENST00000437933 532 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.46□□□□□ -1.54
LIG1P18858 RPL21P89-201ENST00000444021 467 ntBASIC5.46□□□□□ -1.54
LIG1P18858 PRPS1P1-201ENST00000445305 876 ntBASIC5.46□□□□□ -1.54
LIG1P18858 ARL2BPP10-201ENST00000446487 531 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIG1P18858 FTH1P24-201ENST00000503502 462 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC116562.3-201ENST00000506136 177 ntBASIC5.46□□□□□ -1.54
LIG1P18858 MYL12AP1-201ENST00000518490 515 ntBASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-988P-201ENST00000519081 107 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.46□□□□□ -1.54
LIG1P18858 AC068587.5-201ENST00000528506 175 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.46□□□□□ -1.54
LIG1P18858 OR5B10P-201ENST00000532869 642 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC008033.2-201ENST00000542626 177 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC128657.1-201ENST00000549459 145 ntBASIC5.46□□□□□ -1.54
LIG1P18858 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.46□□□□□ -1.54
LIG1P18858 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.46□□□□□ -1.54
LIG1P18858 TVP23CP2-201ENST00000571473 623 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.46□□□□□ -1.54
LIG1P18858 MIR3942-201ENST00000585264 109 ntBASIC5.46□□□□□ -1.54
LIG1P18858 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.46□□□□□ -1.54
LIG1P18858 CTHRC1P1-201ENST00000605383 469 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 RNU6-156P-201ENST00000621869 107 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC091953.3-201ENST00000623220 236 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC244517.12-201ENST00000623581 663 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.46□□□□□ -1.54
LIG1P18858 AL138713.1-201ENST00000624026 2130 ntBASIC5.46□□□□□ -1.54
LIG1P18858 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms