Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 AP001541.1-201ENST00000623322 1904 ntBASIC7.01□□□□□ -1.29
CD44P16070 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
CD44P16070 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 AC009541.1-201ENST00000438279 2662 ntBASIC7.01□□□□□ -1.29
CD44P16070 U3.9-201ENST00000363823 204 ntBASIC7.01□□□□□ -1.29
CD44P16070 RNU6-801P-201ENST00000364087 105 ntBASIC7.01□□□□□ -1.29
CD44P16070 RNVU1-3-201ENST00000364313 161 ntBASIC7.01□□□□□ -1.29
CD44P16070 RN7SKP237-201ENST00000364663 301 ntBASIC7.01□□□□□ -1.29
CD44P16070 Y_RNA.319-201ENST00000365138 92 ntBASIC7.01□□□□□ -1.29
CD44P16070 Y_RNA.544-201ENST00000384650 113 ntBASIC7.01□□□□□ -1.29
CD44P16070 MIR1302-5-201ENST00000408164 150 ntBASIC7.01□□□□□ -1.29
CD44P16070 RN7SKP100-201ENST00000411258 284 ntBASIC7.01□□□□□ -1.29
CD44P16070 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.01□□□□□ -1.29
CD44P16070 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC7.01□□□□□ -1.29
CD44P16070 AF186996.7-201ENST00000492781 209 ntBASIC7.01□□□□□ -1.29
CD44P16070 AC005912.1-201ENST00000495392 255 ntBASIC7.01□□□□□ -1.29
CD44P16070 MTND6P8-201ENST00000503471 522 ntBASIC7.01□□□□□ -1.29
CD44P16070 RNA5SP96-201ENST00000516041 107 ntBASIC7.01□□□□□ -1.29
CD44P16070 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.01□□□□□ -1.29
CD44P16070 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.01□□□□□ -1.29
CD44P16070 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.01□□□□□ -1.29
CD44P16070 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CD44P16070 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CD44P16070 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CD44P16070 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CD44P16070 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CD44P16070 AL021877.2-201ENST00000624442 10684 ntBASIC7.01□□□□□ -1.29
CD44P16070 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7□□□□□ -1.29
CD44P16070 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7□□□□□ -1.29
CD44P16070 SNORD16-201ENST00000362803 99 ntBASIC7□□□□□ -1.29
CD44P16070 RNY1P10-201ENST00000363268 113 ntBASIC7□□□□□ -1.29
CD44P16070 Y_RNA.120-201ENST00000363304 110 ntBASIC7□□□□□ -1.29
CD44P16070 RNU6-647P-201ENST00000364243 107 ntBASIC7□□□□□ -1.29
CD44P16070 RNU6-969P-201ENST00000383900 105 ntBASIC7□□□□□ -1.29
CD44P16070 MT-TT-201ENST00000387460 66 ntBASIC7□□□□□ -1.29
CD44P16070 RNU6-159P-201ENST00000391080 106 ntBASIC7□□□□□ -1.29
CD44P16070 PRELID1P1-201ENST00000403549 660 ntBASIC7□□□□□ -1.29
CD44P16070 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7□□□□□ -1.29
CD44P16070 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7□□□□□ -1.29
CD44P16070 EIF4A1P11-201ENST00000451239 222 ntBASIC7□□□□□ -1.29
CD44P16070 RN7SL83P-201ENST00000468131 297 ntBASIC7□□□□□ -1.29
CD44P16070 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC7□□□□□ -1.29
CD44P16070 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7□□□□□ -1.29
CD44P16070 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC7□□□□□ -1.29
CD44P16070 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7□□□□□ -1.29
CD44P16070 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC7□□□□□ -1.29
CD44P16070 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7□□□□□ -1.29
CD44P16070 AC005332.4-201ENST00000592752 579 ntBASIC7□□□□□ -1.29
CD44P16070 VN1R85P-201ENST00000601587 426 ntBASIC7□□□□□ -1.29
CD44P16070 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7□□□□□ -1.29
CD44P16070 AC025166.1-201ENST00000612411 163 ntBASIC7□□□□□ -1.29
CD44P16070 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7□□□□□ -1.29
CD44P16070 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7□□□□□ -1.29
CD44P16070 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CD44P16070 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7□□□□□ -1.29
CD44P16070 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC7□□□□□ -1.29
CD44P16070 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC7□□□□□ -1.29
CD44P16070 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.99□□□□□ -1.29
CD44P16070 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CD44P16070 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CD44P16070 AC109446.4-201ENST00000623235 2755 ntBASIC6.99□□□□□ -1.29
CD44P16070 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD44P16070 Y_RNA.33-201ENST00000362591 102 ntBASIC6.99□□□□□ -1.29
CD44P16070 Y_RNA.85-201ENST00000363014 111 ntBASIC6.99□□□□□ -1.29
CD44P16070 RNU6-597P-201ENST00000365620 102 ntBASIC6.99□□□□□ -1.29
CD44P16070 RNU6-1286P-201ENST00000383871 107 ntBASIC6.99□□□□□ -1.29
CD44P16070 SNORA26.5-201ENST00000391215 123 ntBASIC6.99□□□□□ -1.29
CD44P16070 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.99□□□□□ -1.29
CD44P16070 RPS27AP12-201ENST00000429552 465 ntBASIC6.99□□□□□ -1.29
CD44P16070 RN7SL790P-201ENST00000474043 298 ntBASIC6.99□□□□□ -1.29
CD44P16070 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.99□□□□□ -1.29
CD44P16070 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.99□□□□□ -1.29
CD44P16070 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.99□□□□□ -1.29
CD44P16070 RN7SL657P-201ENST00000582431 293 ntBASIC6.99□□□□□ -1.29
CD44P16070 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.99□□□□□ -1.29
CD44P16070 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.99□□□□□ -1.29
CD44P16070 AC012640.5-201ENST00000623897 319 ntBASIC6.99□□□□□ -1.29
CD44P16070 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.99□□□□□ -1.29
CD44P16070 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CD44P16070 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms