Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.2□□□□□ -2.06
COL11A1P12107 HSPE1P28-201ENST00000443139 211 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.2□□□□□ -2.06
COL11A1P12107 MTND2P3-201ENST00000452458 470 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 MTAPP1-201ENST00000489154 819 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 RNU2-58P-201ENST00000516403 183 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 RN7SKP277-201ENST00000516895 283 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.2□□□□□ -2.06
COL11A1P12107 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.2□□□□□ -2.06
COL11A1P12107 AC090525.3-201ENST00000605601 189 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL11A1P12107 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL11A1P12107 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL11A1P12107 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 MIR591-201ENST00000385290 95 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 AC104332.2-201ENST00000429959 156 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AC073901.1-201ENST00000462471 408 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AC108157.1-201ENST00000510511 539 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
COL11A1P12107 HMGN1P28-201ENST00000521340 364 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 AP001180.3-201ENST00000582221 145 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL11A1P12107 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 RNU4-31P-201ENST00000384211 141 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 MIR7-1-201ENST00000384871 110 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
COL11A1P12107 RNU2-71P-201ENST00000411395 189 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AL512504.1-201ENST00000415494 778 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AL031663.1-201ENST00000437445 219 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 Z77249.1-201ENST00000444622 1175 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.19□□□□□ -2.06
COL11A1P12107 AL513343.1-201ENST00000451818 792 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AC109486.1-201ENST00000486833 374 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.19□□□□□ -2.06
COL11A1P12107 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
COL11A1P12107 RNU6-1308P-201ENST00000516817 103 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 SNORA31.26-201ENST00000517250 137 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AC067904.2-201ENST00000517322 1283 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.19□□□□□ -2.06
COL11A1P12107 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.19□□□□□ -2.06
COL11A1P12107 MIR4255-201ENST00000579351 72 ntBASIC2.19□□□□□ -2.06
COL11A1P12107 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
COL11A1P12107 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL11A1P12107 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL11A1P12107 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL11A1P12107 RNU6-152P-201ENST00000384037 107 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 LUZP4P1-201ENST00000415420 344 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL11A1P12107 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.18□□□□□ -2.06
COL11A1P12107 RPL7P46-201ENST00000425129 740 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.18□□□□□ -2.06
COL11A1P12107 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.18□□□□□ -2.06
COL11A1P12107 MTND4LP22-201ENST00000508209 276 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AC104986.1-201ENST00000517978 436 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.18□□□□□ -2.06
COL11A1P12107 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 OR4T1P-201ENST00000554933 911 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 MIR3690-201ENST00000580266 75 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.18□□□□□ -2.06
COL11A1P12107 AC139769.3-201ENST00000618383 175 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 LINC00216-201ENST00000623548 1126 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AP000720.1-201ENST00000625091 483 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
COL11A1P12107 AC091948.2-201ENST00000636510 279 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 AL163152.1-201ENST00000642001 374 ntBASIC2.18□□□□□ -2.06
COL11A1P12107 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL11A1P12107 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL11A1P12107 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC110774.1-201ENST00000623567 2018 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.17□□□□□ -2.06
COL11A1P12107 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL11A1P12107 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL11A1P12107 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC244098.2-201ENST00000422068 99 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL11A1P12107 Z85994.2-201ENST00000434327 452 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 RSL24D1P8-201ENST00000434442 492 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC023512.1-201ENST00000444513 499 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
COL11A1P12107 AL049829.1-201ENST00000465411 156 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.17□□□□□ -2.06
COL11A1P12107 NAMPTP2-201ENST00000505629 1115 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 MTND2P31-201ENST00000512602 616 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 RN7SKP234-201ENST00000517173 224 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC074029.2-201ENST00000551045 634 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 OR4K7P-201ENST00000580232 945 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 MIR4781-201ENST00000585250 76 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 RPAP2P1-201ENST00000603626 1168 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 KATNBL1P1-201ENST00000605192 748 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC005539.1-201ENST00000443768 1479 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL11A1P12107 RNU6-629P-201ENST00000384061 103 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms