Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD53B-201ENST00000577887 78 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.74□□□□□ -1.97
TOP2AP11388 AL121594.5-201ENST00000631724 573 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.74□□□□□ -1.97
TOP2AP11388 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
TOP2AP11388 MIR518E-201ENST00000385252 88 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 SNRPGP9-201ENST00000456025 225 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 AC092451.1-201ENST00000480211 153 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP2AP11388 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP2AP11388 OR4K8P-201ENST00000578842 1048 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 BX649567.1-201ENST00000642071 1134 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TOP2AP11388 NDUFA5P6-201ENST00000542110 379 ntBASIC2.73□□□□□ -1.97
TOP2AP11388 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.72□□□□□ -1.97
TOP2AP11388 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.72□□□□□ -1.97
TOP2AP11388 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.72□□□□□ -1.97
TOP2AP11388 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.72□□□□□ -1.97
TOP2AP11388 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.72□□□□□ -1.97
TOP2AP11388 NDUFA5P4-201ENST00000436704 385 ntBASIC2.72□□□□□ -1.97
TOP2AP11388 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.72□□□□□ -1.97
TOP2AP11388 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TOP2AP11388 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TOP2AP11388 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.72□□□□□ -1.97
TOP2AP11388 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.72□□□□□ -1.97
TOP2AP11388 AC006026.1-201ENST00000444025 1803 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 SUMO2P12-201ENST00000405924 140 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 MTCYBP45-201ENST00000435243 565 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.71□□□□□ -1.98
TOP2AP11388 snoU13.18-201ENST00000459483 104 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 AC092754.2-201ENST00000463506 460 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 SNORA31.24-201ENST00000517232 57 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.71□□□□□ -1.98
TOP2AP11388 AC105429.2-201ENST00000610567 517 ntBASIC2.71□□□□□ -1.98
TOP2AP11388 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
TOP2AP11388 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.98
TOP2AP11388 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
TOP2AP11388 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
TOP2AP11388 Y_RNA.327-201ENST00000365201 102 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.7□□□□□ -1.98
TOP2AP11388 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TOP2AP11388 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.7□□□□□ -1.98
TOP2AP11388 MTND1P23-201ENST00000416931 372 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 AC245517.4-201ENST00000448601 281 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.7□□□□□ -1.98
TOP2AP11388 AL137159.1-201ENST00000452808 512 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.7□□□□□ -1.98
TOP2AP11388 TOMM22P6-201ENST00000465035 409 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 AC108734.3-201ENST00000481241 1165 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 MTCO3P44-201ENST00000510977 541 ntBASIC2.7□□□□□ -1.98
TOP2AP11388 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TOP2AP11388 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
TOP2AP11388 HSPE1P11-201ENST00000339579 310 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 MIR517C-201ENST00000385103 95 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TOP2AP11388 AC092832.1-201ENST00000422934 400 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 RAB9AP5-201ENST00000437794 597 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 RAB9AP2-201ENST00000443911 597 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 PPP1R2P5-201ENST00000457256 603 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 MTCO1P42-201ENST00000457379 726 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 MTCYBP37-201ENST00000510642 1133 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 RNU6-1334P-201ENST00000516032 105 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 MIR4446-201ENST00000578505 67 ntBASIC2.69□□□□□ -1.98
TOP2AP11388 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
TOP2AP11388 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.69□□□□□ -1.98
TOP2AP11388 SNORA7.1-201ENST00000363750 139 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.68□□□□□ -1.98
TOP2AP11388 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.68□□□□□ -1.98
TOP2AP11388 ARPC3P2-201ENST00000457786 533 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.68□□□□□ -1.98
TOP2AP11388 SETP2-201ENST00000553886 926 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 AC019159.1-201ENST00000605094 187 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 MTND5P35-201ENST00000557537 1720 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TOP2AP11388 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TOP2AP11388 AC009474.2-201ENST00000451383 136 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.68□□□□□ -1.98
TOP2AP11388 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.68□□□□□ -1.98
TOP2AP11388 RPL23AP55-201ENST00000498163 452 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
TOP2AP11388 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.68□□□□□ -1.98
TOP2AP11388 AC024614.2-201ENST00000577584 372 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
TOP2AP11388 AL109809.4-201ENST00000603520 2185 ntBASIC2.67□□□□□ -1.98
TOP2AP11388 SNORA67.6-201ENST00000391093 99 ntBASIC2.67□□□□□ -1.98
TOP2AP11388 RPS29P29-201ENST00000456396 171 ntBASIC2.67□□□□□ -1.98
TOP2AP11388 RNU1-123P-201ENST00000458950 160 ntBASIC2.67□□□□□ -1.98
TOP2AP11388 HMGN1P8-201ENST00000463578 288 ntBASIC2.67□□□□□ -1.98
TOP2AP11388 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP2AP11388 Y_RNA.540-201ENST00000384638 111 ntBASIC2.66□□□□□ -1.98
TOP2AP11388 AL035405.1-201ENST00000400795 710 ntBASIC2.66□□□□□ -1.98
TOP2AP11388 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.66□□□□□ -1.98
TOP2AP11388 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP2AP11388 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.66□□□□□ -1.98
TOP2AP11388 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
TOP2AP11388 RNA5SP490-201ENST00000517141 136 ntBASIC2.66□□□□□ -1.98
TOP2AP11388 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.66□□□□□ -1.98
TOP2AP11388 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP2AP11388 AC233981.2-201ENST00000611524 1614 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms