Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGB1P09429 RPS23P7-201ENST00000466210 444 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGB1P09429 AL160314.1-201ENST00000490836 438 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 AL132838.2-201ENST00000492041 314 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 DSTNP2-201ENST00000504533 515 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P09429 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 RNA5SP290-201ENST00000517133 127 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P09429 PCMTD1P2-201ENST00000565017 355 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 AL356432.3-201ENST00000568952 465 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 AC245517.5-201ENST00000611529 162 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 MIR6830-201ENST00000636015 70 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 MAPK10-373ENST00000641983 6772 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGB1P09429 BDP1P-201ENST00000582658 1990 ntBASIC4.71□□□□□ -1.66
HMGB1P09429 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGB1P09429 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P09429 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMGB1P09429 RNA5SP399-201ENST00000364003 117 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 RNA5SP130-201ENST00000364431 114 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 RNU6-217P-201ENST00000384164 104 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 RPS20P2-201ENST00000402520 389 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 USP9YP26-201ENST00000421008 661 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 AL645937.1-202ENST00000421799 937 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 HMGB3P11-201ENST00000440127 604 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 H2AFZP6-201ENST00000444403 394 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 AC020550.1-201ENST00000447385 163 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P09429 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P09429 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P09429 RPL12P25-201ENST00000455592 494 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 NDUFA5P9-201ENST00000472609 340 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 ARL4AP2-201ENST00000507378 601 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P09429 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P09429 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P09429 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P09429 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 AL591424.2-201ENST00000617023 128 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 AL021368.2-201ENST00000606125 5352 ntBASIC4.7□□□□□ -1.66
HMGB1P09429 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P09429 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P09429 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB1P09429 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
HMGB1P09429 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB1P09429 AC022336.2-201ENST00000568966 2538 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 FTLP6-201ENST00000355274 422 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 RNU6-501P-201ENST00000364072 100 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 RHEBP3-201ENST00000411920 351 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 RPL7P8-201ENST00000411964 730 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AL356095.1-201ENST00000417217 199 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 BX890604.2-201ENST00000427883 474 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AL512649.1-201ENST00000428997 581 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AC109583.1-201ENST00000432156 268 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 TIMM9P1-201ENST00000436122 256 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB1P09429 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB1P09429 RPL7P19-201ENST00000469948 618 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AC026979.1-201ENST00000492525 396 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB1P09429 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB1P09429 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB1P09429 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB1P09429 AC063944.3-201ENST00000609969 533 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AC140725.3-201ENST00000616193 880 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB1P09429 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB1P09429 AC112484.5-201ENST00000624189 228 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 AC093591.3-201ENST00000634516 308 ntBASIC4.69□□□□□ -1.66
HMGB1P09429 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB1P09429 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB1P09429 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 AL445523.1-201ENST00000451184 1362 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 AC010680.1-201ENST00000590024 3590 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB1P09429 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB1P09429 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 AL359634.1-202ENST00000404721 284 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 RNA5SP39-201ENST00000411245 120 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB1P09429 MTND5P25-201ENST00000430499 799 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB1P09429 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB1P09429 AL714022.1-201ENST00000439897 151 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 RPL23AP58-201ENST00000440453 469 ntBASIC4.68□□□□□ -1.66
HMGB1P09429 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB1P09429 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB1P09429 RPL37P6-201ENST00000460682 294 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms