Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.35□□□□□ -1.87
VIMP08670 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.35□□□□□ -1.87
VIMP08670 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VIMP08670 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.87
VIMP08670 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.34□□□□□ -1.87
VIMP08670 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.87
VIMP08670 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VIMP08670 DEFB108F-201ENST00000344638 222 ntBASIC3.34□□□□□ -1.87
VIMP08670 RN7SKP227-201ENST00000364445 330 ntBASIC3.34□□□□□ -1.87
VIMP08670 SNORA70.2-201ENST00000364506 135 ntBASIC3.34□□□□□ -1.87
VIMP08670 RNU6-1078P-201ENST00000364522 103 ntBASIC3.34□□□□□ -1.87
VIMP08670 RNU6-1200P-201ENST00000384162 107 ntBASIC3.34□□□□□ -1.87
VIMP08670 RPL32P23-201ENST00000397237 405 ntBASIC3.34□□□□□ -1.87
VIMP08670 PPIAP31-201ENST00000405422 495 ntBASIC3.34□□□□□ -1.87
VIMP08670 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VIMP08670 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.34□□□□□ -1.87
VIMP08670 AL807761.1-201ENST00000417622 171 ntBASIC3.34□□□□□ -1.87
VIMP08670 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
VIMP08670 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 C4BPAP2-201ENST00000428434 478 ntBASIC3.34□□□□□ -1.87
VIMP08670 AL035407.1-201ENST00000429211 571 ntBASIC3.34□□□□□ -1.87
VIMP08670 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.34□□□□□ -1.87
VIMP08670 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AC112653.1-201ENST00000443851 386 ntBASIC3.34□□□□□ -1.87
VIMP08670 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 AL592447.1-201ENST00000447592 540 ntBASIC3.34□□□□□ -1.87
VIMP08670 Z99127.3-201ENST00000448158 395 ntBASIC3.34□□□□□ -1.87
VIMP08670 AP000542.1-201ENST00000448473 371 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.34□□□□□ -1.87
VIMP08670 AL109741.2-201ENST00000455561 343 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AC112673.1-201ENST00000513168 575 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC026801.2-201ENST00000515352 425 ntBASIC3.34□□□□□ -1.87
VIMP08670 RN7SKP287-201ENST00000516546 266 ntBASIC3.34□□□□□ -1.87
VIMP08670 RANP9-201ENST00000519957 271 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.34□□□□□ -1.87
VIMP08670 ERHP1-201ENST00000523006 310 ntBASIC3.34□□□□□ -1.87
VIMP08670 DEFB108D-201ENST00000527787 222 ntBASIC3.34□□□□□ -1.87
VIMP08670 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
VIMP08670 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 AC136618.2-201ENST00000575091 400 ntBASIC3.34□□□□□ -1.87
VIMP08670 MIR4700-201ENST00000578311 74 ntBASIC3.34□□□□□ -1.87
VIMP08670 MIR4999-201ENST00000585029 91 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC105224.1-201ENST00000587055 421 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.34□□□□□ -1.87
VIMP08670 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.34□□□□□ -1.87
VIMP08670 AC006557.5-201ENST00000603126 811 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC093424.1-201ENST00000604999 338 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AC021755.4-201ENST00000616620 456 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC068831.7-201ENST00000616954 363 ntBASIC3.34□□□□□ -1.87
VIMP08670 AC243312.2-201ENST00000623340 601 ntBASIC3.34□□□□□ -1.87
VIMP08670 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
VIMP08670 AP000526.1-201ENST00000603308 1388 ntBASIC3.34□□□□□ -1.88
VIMP08670 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
VIMP08670 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VIMP08670 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 AL672167.1-206ENST00000356293 943 ntBASIC3.33□□□□□ -1.88
VIMP08670 RPL32P3-201ENST00000359025 275 ntBASIC3.33□□□□□ -1.88
VIMP08670 RNU6-853P-201ENST00000364306 107 ntBASIC3.33□□□□□ -1.88
VIMP08670 RNA5SP88-201ENST00000365560 109 ntBASIC3.33□□□□□ -1.88
VIMP08670 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 RNU6-76P-201ENST00000384060 104 ntBASIC3.33□□□□□ -1.88
VIMP08670 RNU1-13P-201ENST00000384499 162 ntBASIC3.33□□□□□ -1.88
VIMP08670 RNU6-114P-201ENST00000384704 105 ntBASIC3.33□□□□□ -1.88
VIMP08670 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 RPS3AP26-201ENST00000398259 784 ntBASIC3.33□□□□□ -1.88
VIMP08670 RPL5P18-201ENST00000406671 891 ntBASIC3.33□□□□□ -1.88
VIMP08670 RN7SKP266-201ENST00000410232 287 ntBASIC3.33□□□□□ -1.88
VIMP08670 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
VIMP08670 MTCO1P17-201ENST00000411522 491 ntBASIC3.33□□□□□ -1.88
VIMP08670 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 RPL7P2-201ENST00000427639 268 ntBASIC3.33□□□□□ -1.88
VIMP08670 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.33□□□□□ -1.88
VIMP08670 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 AL354941.1-201ENST00000438600 464 ntBASIC3.33□□□□□ -1.88
VIMP08670 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
VIMP08670 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
VIMP08670 AC026979.1-201ENST00000492525 396 ntBASIC3.33□□□□□ -1.88
VIMP08670 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.33□□□□□ -1.88
VIMP08670 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
VIMP08670 SNORA31.22-201ENST00000517204 135 ntBASIC3.33□□□□□ -1.88
VIMP08670 AP003461.1-201ENST00000528866 78 ntBASIC3.33□□□□□ -1.88
VIMP08670 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms