Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAPGEF3O95398 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAPGEF3O95398 SNORA44-201ENST00000384584 132 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 ISCA1P1-201ENST00000426679 387 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC073614.1-201ENST00000438690 650 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 NANOGNBP1-201ENST00000448444 480 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC010655.1-201ENST00000449336 292 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC005297.2-201ENST00000450430 606 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 DEFB109F-201ENST00000491870 277 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 NDUFB4P2-201ENST00000509515 391 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AP003467.2-201ENST00000520175 319 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC087883.1-201ENST00000551882 391 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AL121603.1-201ENST00000553815 142 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC091965.4-201ENST00000607691 587 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC072046.2-201ENST00000618366 268 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC073534.2-201ENST00000620377 381 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAPGEF3O95398 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.34□□□□□ -1.56
RAPGEF3O95398 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 RNU6-744P-201ENST00000365557 107 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 RNU6-1316P-201ENST00000384242 108 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 RPL31P1-201ENST00000398116 372 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 GLRXP1-201ENST00000423261 334 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 PTGES3P3-201ENST00000511479 482 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC093677.1-201ENST00000514414 678 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 RNU6-506P-201ENST00000516553 94 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 EEF1B2P4-201ENST00000551398 348 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 RPL21P5-201ENST00000554662 472 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AL390208.1-201ENST00000605885 644 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC126118.1-201ENST00000607744 628 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC022106.2-201ENST00000620114 757 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 AC007998.5-201ENST00000622938 237 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 SEPT14P19-203ENST00000633205 211 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 AL049780.3-201ENST00000624612 1583 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.33□□□□□ -1.56
RAPGEF3O95398 CCT4P2-201ENST00000233836 1548 ntBASIC5.33□□□□□ -1.56
RAPGEF3O95398 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAPGEF3O95398 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAPGEF3O95398 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAPGEF3O95398 AL645937.1-201ENST00000641739 1652 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 RNU6-28P-201ENST00000362378 107 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 RNU6-343P-201ENST00000364709 104 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 RPL31P45-201ENST00000419532 356 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 MTND6P13-201ENST00000443510 523 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 HMGB1P15-201ENST00000453854 435 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC004924.1-201ENST00000480160 781 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 RN7SKP244-201ENST00000516513 307 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 MTCO2P4-201ENST00000517968 247 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 DEFB108A-201ENST00000530110 222 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 MIR4458-201ENST00000578872 75 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms