Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MIR6130-201ENST00000619419 109 ntBASIC3.38□□□□□ -1.87
SIX3O95343 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
SIX3O95343 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX3O95343 AC092447.10-201ENST00000620607 1652 ntBASIC3.38□□□□□ -1.87
SIX3O95343 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SIX3O95343 AC087359.1-201ENST00000508335 1740 ntBASIC3.38□□□□□ -1.87
SIX3O95343 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX3O95343 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SIX3O95343 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SIX3O95343 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX3O95343 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
SIX3O95343 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
SIX3O95343 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
SIX3O95343 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX3O95343 RNU6-723P-201ENST00000383973 107 ntBASIC3.37□□□□□ -1.87
SIX3O95343 RNU6-637P-201ENST00000384050 107 ntBASIC3.37□□□□□ -1.87
SIX3O95343 RNU6-114P-201ENST00000384704 105 ntBASIC3.37□□□□□ -1.87
SIX3O95343 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX3O95343 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
SIX3O95343 RPS4XP3-201ENST00000398541 413 ntBASIC3.37□□□□□ -1.87
SIX3O95343 SKINT1L-201ENST00000401057 817 ntBASIC3.37□□□□□ -1.87
SIX3O95343 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX3O95343 AL590383.1-201ENST00000428602 75 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL035407.1-201ENST00000429211 571 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX3O95343 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
SIX3O95343 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL117351.1-201ENST00000438864 766 ntBASIC3.37□□□□□ -1.87
SIX3O95343 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 ACTR3P3-201ENST00000480448 893 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL049874.1-201ENST00000489560 388 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC106872.3-201ENST00000495104 446 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AL358832.1-201ENST00000497800 389 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX3O95343 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.37□□□□□ -1.87
SIX3O95343 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX3O95343 AC011260.1-201ENST00000578420 472 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC105224.1-201ENST00000587055 421 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC006116.10-201ENST00000591836 581 ntBASIC3.37□□□□□ -1.87
SIX3O95343 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC107952.2-201ENST00000606048 486 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
SIX3O95343 MIR6076-201ENST00000617521 113 ntBASIC3.37□□□□□ -1.87
SIX3O95343 AC243312.2-201ENST00000623340 601 ntBASIC3.37□□□□□ -1.87
SIX3O95343 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX3O95343 RIOK3P1-201ENST00000418778 1528 ntBASIC3.37□□□□□ -1.87
SIX3O95343 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX3O95343 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX3O95343 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX3O95343 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
SIX3O95343 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 RPL21P132-201ENST00000331267 462 ntBASIC3.36□□□□□ -1.87
SIX3O95343 Y_RNA.18-201ENST00000362461 102 ntBASIC3.36□□□□□ -1.87
SIX3O95343 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 MIR183-201ENST00000384958 110 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL354719.1-201ENST00000406535 843 ntBASIC3.36□□□□□ -1.87
SIX3O95343 RNU6-516P-201ENST00000411381 104 ntBASIC3.36□□□□□ -1.87
SIX3O95343 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 Z99755.1-201ENST00000414048 380 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL022400.1-201ENST00000423946 935 ntBASIC3.36□□□□□ -1.87
SIX3O95343 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX3O95343 AL512649.1-201ENST00000428997 581 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL356867.1-201ENST00000429623 299 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX3O95343 MTND1P9-201ENST00000453775 944 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX3O95343 SNORD121B-201ENST00000458838 81 ntBASIC3.36□□□□□ -1.87
SIX3O95343 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
SIX3O95343 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SIX3O95343 RNU6-798P-201ENST00000516912 103 ntBASIC3.36□□□□□ -1.87
SIX3O95343 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX3O95343 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 AC020914.6-201ENST00000594327 272 ntBASIC3.36□□□□□ -1.87
SIX3O95343 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 AC009268.2-201ENST00000621925 457 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AC023510.2-201ENST00000622162 746 ntBASIC3.36□□□□□ -1.87
SIX3O95343 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX3O95343 MIR4275-201ENST00000636486 87 ntBASIC3.36□□□□□ -1.87
SIX3O95343 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX3O95343 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms