Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RTN3O95197 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.86□□□□□ -1.79
RTN3O95197 AL359704.1-201ENST00000411586 781 ntBASIC3.86□□□□□ -1.79
RTN3O95197 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 MTND1P21-201ENST00000412991 285 ntBASIC3.86□□□□□ -1.79
RTN3O95197 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN3O95197 RPL21P32-201ENST00000419877 477 ntBASIC3.86□□□□□ -1.79
RTN3O95197 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN3O95197 RPS27AP14-201ENST00000422868 454 ntBASIC3.86□□□□□ -1.79
RTN3O95197 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 SKP1P1-201ENST00000438081 489 ntBASIC3.86□□□□□ -1.79
RTN3O95197 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 PDSS1P2-201ENST00000449397 678 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC099563.1-201ENST00000456086 418 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AP1S2P1-201ENST00000457344 379 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC112198.1-201ENST00000505369 1220 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC104619.4-201ENST00000510773 249 ntBASIC3.86□□□□□ -1.79
RTN3O95197 RNU1-61P-201ENST00000516107 151 ntBASIC3.86□□□□□ -1.79
RTN3O95197 RANP9-201ENST00000519957 271 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 AL121576.1-201ENST00000556055 276 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 AC090888.1-201ENST00000561335 1141 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 PCMTD1P2-201ENST00000565017 355 ntBASIC3.86□□□□□ -1.79
RTN3O95197 MTCYBP22-201ENST00000603788 447 ntBASIC3.86□□□□□ -1.79
RTN3O95197 MIR7844-201ENST00000616161 122 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.86□□□□□ -1.79
RTN3O95197 AC004777.1-201ENST00000624317 287 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC091905.1-201ENST00000624400 311 ntBASIC3.86□□□□□ -1.79
RTN3O95197 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 AC092192.1-201ENST00000633154 1018 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC009093.8-201ENST00000641769 292 ntBASIC3.86□□□□□ -1.79
RTN3O95197 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN3O95197 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 RNY4P24-201ENST00000362735 96 ntBASIC3.85□□□□□ -1.79
RTN3O95197 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.85□□□□□ -1.79
RTN3O95197 RNU6-637P-201ENST00000384050 107 ntBASIC3.85□□□□□ -1.79
RTN3O95197 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RTN3O95197 AP000567.1-201ENST00000406413 156 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.85□□□□□ -1.79
RTN3O95197 MTND2P18-201ENST00000419962 1030 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC245054.1-201ENST00000420944 258 ntBASIC3.85□□□□□ -1.79
RTN3O95197 USP9YP26-201ENST00000421008 661 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.85□□□□□ -1.79
RTN3O95197 AC090774.1-201ENST00000435925 246 ntBASIC3.85□□□□□ -1.79
RTN3O95197 HSPD1P21-201ENST00000436541 245 ntBASIC3.85□□□□□ -1.79
RTN3O95197 RABEPKP1-201ENST00000440529 1026 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RTN3O95197 RPL7P36-201ENST00000444633 681 ntBASIC3.85□□□□□ -1.79
RTN3O95197 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC004069.2-201ENST00000505438 1114 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC111000.2-201ENST00000507775 550 ntBASIC3.85□□□□□ -1.79
RTN3O95197 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.85□□□□□ -1.79
RTN3O95197 ARL2BPP6-201ENST00000512757 439 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 RN7SKP13-201ENST00000515933 244 ntBASIC3.85□□□□□ -1.79
RTN3O95197 RNU6-759P-201ENST00000516740 103 ntBASIC3.85□□□□□ -1.79
RTN3O95197 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC125611.2-201ENST00000551907 647 ntBASIC3.85□□□□□ -1.79
RTN3O95197 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC060771.1-201ENST00000582031 164 ntBASIC3.85□□□□□ -1.79
RTN3O95197 MIR4307-201ENST00000582802 84 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AL357094.1-201ENST00000603845 844 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC010591.1-201ENST00000603941 649 ntBASIC3.85□□□□□ -1.79
RTN3O95197 PRELID3BP8-201ENST00000604148 295 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC091965.4-201ENST00000607691 587 ntBASIC3.85□□□□□ -1.79
RTN3O95197 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC008443.7-201ENST00000622195 246 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AL356266.1-201ENST00000623311 483 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC243312.2-201ENST00000623340 601 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AF246928.1-201ENST00000623768 87 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC091965.5-201ENST00000624785 342 ntBASIC3.85□□□□□ -1.79
RTN3O95197 MIR4275-201ENST00000636486 87 ntBASIC3.85□□□□□ -1.79
RTN3O95197 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RTN3O95197 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 AC138915.3-201ENST00000562908 1389 ntBASIC3.85□□□□□ -1.79
RTN3O95197 AC005832.2-201ENST00000538921 1430 ntBASIC3.85□□□□□ -1.79
RTN3O95197 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.85□□□□□ -1.79
RTN3O95197 AC091152.2-201ENST00000591628 2569 ntBASIC3.85□□□□□ -1.79
RTN3O95197 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN3O95197 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms