Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 AP000542.1-201ENST00000448473 371 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 MTND1P11-201ENST00000456661 876 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 MTCO3P2-201ENST00000457365 171 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 UBDP1-202ENST00000457888 382 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 RNU6-1218P-201ENST00000458990 108 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 RPS29P25-201ENST00000481709 171 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 FAM172BP-201ENST00000487497 1089 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 OR5H5P-201ENST00000503164 928 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 FTH1P21-201ENST00000512179 511 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC025465.4-201ENST00000513422 638 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 SNORA70.14-201ENST00000516205 110 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 RNA5SP164-201ENST00000516533 110 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 Y_RNA.693-201ENST00000516641 110 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.5□□□□□ -1.69
CDKL5O76039 AC008127.2-201ENST00000549925 1075 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 AL512360.1-201ENST00000555346 234 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.5□□□□□ -1.69
CDKL5O76039 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 AC107954.1-201ENST00000565906 727 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC136624.4-201ENST00000573044 370 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 AL359999.1-201ENST00000604513 294 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC007363.1-201ENST00000604736 620 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 HMGB1P50-201ENST00000605814 607 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AL355816.1-201ENST00000607951 118 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 MIR486-1-201ENST00000612171 68 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AC007742.2-201ENST00000618226 398 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 MIR6810-201ENST00000622701 70 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDKL5O76039 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDKL5O76039 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDKL5O76039 AL136964.1-201ENST00000622038 2990 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDKL5O76039 RPL23AP57-201ENST00000332361 466 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 RNU1-85P-201ENST00000364127 164 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 RNU6-343P-201ENST00000364709 104 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 RNU6-1009P-201ENST00000390996 107 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 EIF5P1-201ENST00000400019 1231 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.49□□□□□ -1.69
CDKL5O76039 RPS27AP12-201ENST00000429552 465 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AL117339.2-201ENST00000430475 180 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 MTCO2P11-201ENST00000431069 680 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AF228730.2-201ENST00000438784 848 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.49□□□□□ -1.69
CDKL5O76039 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.49□□□□□ -1.69
CDKL5O76039 RN7SL385P-201ENST00000468873 276 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.49□□□□□ -1.69
CDKL5O76039 AC108043.1-201ENST00000512696 574 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AC010493.1-201ENST00000513479 292 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.49□□□□□ -1.69
CDKL5O76039 AC025678.1-201ENST00000567861 338 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.49□□□□□ -1.69
CDKL5O76039 UBE2V2P2-201ENST00000587677 504 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AC245014.2-201ENST00000603689 287 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AC246785.4-201ENST00000605374 287 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AP001330.5-201ENST00000607176 411 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.49□□□□□ -1.69
CDKL5O76039 AL445264.1-201ENST00000621719 171 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.49□□□□□ -1.69
CDKL5O76039 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDKL5O76039 AC138915.3-201ENST00000562908 1389 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 FAM35DP-201ENST00000323387 2712 ntBASIC4.49□□□□□ -1.69
CDKL5O76039 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
CDKL5O76039 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 MAPK10-372ENST00000641954 3413 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 RNU6-1085P-201ENST00000363576 107 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 MIR92A2-201ENST00000385299 75 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 ARF4P3-201ENST00000397387 509 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 DSTNP4-201ENST00000399472 474 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 RPL21P111-201ENST00000418453 477 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 RPL36P19-201ENST00000430744 301 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 RPL21P89-201ENST00000444021 467 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC002381.1-201ENST00000447049 280 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms