Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.91□□□□□ -1.78
CUX2O14529 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CUX2O14529 RNU6-792P-201ENST00000363490 107 ntBASIC3.91□□□□□ -1.78
CUX2O14529 RNA5SP344-201ENST00000411081 104 ntBASIC3.91□□□□□ -1.78
CUX2O14529 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.91□□□□□ -1.78
CUX2O14529 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.91□□□□□ -1.78
CUX2O14529 AC078857.1-201ENST00000469870 667 ntBASIC3.91□□□□□ -1.78
CUX2O14529 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.91□□□□□ -1.78
CUX2O14529 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.91□□□□□ -1.78
CUX2O14529 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.91□□□□□ -1.78
CUX2O14529 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.91□□□□□ -1.78
CUX2O14529 AC096586.1-201ENST00000610267 561 ntBASIC3.91□□□□□ -1.78
CUX2O14529 FRG1HP-204ENST00000617940 757 ntBASIC3.91□□□□□ -1.78
CUX2O14529 AC067852.7-201ENST00000623270 535 ntBASIC3.91□□□□□ -1.78
CUX2O14529 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CUX2O14529 AL139811.1-201ENST00000424779 2299 ntBASIC3.9□□□□□ -1.78
CUX2O14529 AL512283.1-201ENST00000606756 1384 ntBASIC3.9□□□□□ -1.78
CUX2O14529 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.9□□□□□ -1.78
CUX2O14529 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CUX2O14529 AC066616.2-201ENST00000559334 1481 ntBASIC3.9□□□□□ -1.79
CUX2O14529 SNORD21-201ENST00000383953 95 ntBASIC3.9□□□□□ -1.79
CUX2O14529 SNORA67.3-201ENST00000384366 140 ntBASIC3.9□□□□□ -1.79
CUX2O14529 MIR583-201ENST00000384846 75 ntBASIC3.9□□□□□ -1.79
CUX2O14529 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CUX2O14529 RNU2-2P-201ENST00000410396 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 MTCO2P17-201ENST00000424336 677 ntBASIC3.9□□□□□ -1.79
CUX2O14529 ELOCP6-201ENST00000429066 328 ntBASIC3.9□□□□□ -1.79
CUX2O14529 ELOCP12-201ENST00000458706 328 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AC008628.1-201ENST00000508663 265 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.9□□□□□ -1.79
CUX2O14529 MTND2P31-201ENST00000512602 616 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.9□□□□□ -1.79
CUX2O14529 AC139103.1-201ENST00000534696 1030 ntBASIC3.9□□□□□ -1.79
CUX2O14529 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.9□□□□□ -1.79
CUX2O14529 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.9□□□□□ -1.79
CUX2O14529 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.9□□□□□ -1.79
CUX2O14529 MTCO3P13-201ENST00000577757 781 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AC103710.1-201ENST00000610003 901 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.15-201ENST00000611544 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.16-201ENST00000613119 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.12-201ENST00000613778 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.20-201ENST00000613956 192 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.9-201ENST00000615427 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.11-201ENST00000616345 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.2-201ENST00000616535 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.3-201ENST00000617785 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.19-201ENST00000618602 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 RNU2-1-201ENST00000618664 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.9□□□□□ -1.79
CUX2O14529 U2.6-201ENST00000619225 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.5-201ENST00000619465 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 U2.10-201ENST00000620268 191 ntBASIC3.9□□□□□ -1.79
CUX2O14529 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.9□□□□□ -1.79
CUX2O14529 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUX2O14529 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CUX2O14529 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CUX2O14529 SNORD56.4-201ENST00000363883 71 ntBASIC3.89□□□□□ -1.79
CUX2O14529 DNAJC19P6-201ENST00000401853 280 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AL158050.1-201ENST00000416077 457 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AL513175.2-201ENST00000422071 443 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.89□□□□□ -1.79
CUX2O14529 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.89□□□□□ -1.79
CUX2O14529 RPL36AP33-201ENST00000450395 310 ntBASIC3.89□□□□□ -1.79
CUX2O14529 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.89□□□□□ -1.79
CUX2O14529 AC012170.1-201ENST00000495139 359 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.89□□□□□ -1.79
CUX2O14529 AC112518.2-201ENST00000508565 425 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AP003717.3-201ENST00000544832 1180 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AC025281.1-201ENST00000567026 265 ntBASIC3.89□□□□□ -1.79
CUX2O14529 AC067747.1-201ENST00000608026 250 ntBASIC3.89□□□□□ -1.79
CUX2O14529 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.89□□□□□ -1.79
CUX2O14529 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CUX2O14529 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUX2O14529 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CUX2O14529 MIR153-1-201ENST00000384914 90 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.88□□□□□ -1.79
CUX2O14529 AL445183.3-201ENST00000414168 502 ntBASIC3.88□□□□□ -1.79
CUX2O14529 ATG3P1-201ENST00000419507 911 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AL512661.1-201ENST00000434586 1253 ntBASIC3.88□□□□□ -1.79
CUX2O14529 MUPP-201ENST00000438111 566 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.88□□□□□ -1.79
CUX2O14529 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.88□□□□□ -1.79
CUX2O14529 AC090071.1-201ENST00000507713 644 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.88□□□□□ -1.79
CUX2O14529 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.88□□□□□ -1.79
CUX2O14529 AC093510.2-201ENST00000562820 896 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AC010546.1-201ENST00000569391 485 ntBASIC3.88□□□□□ -1.79
CUX2O14529 MIR4506-201ENST00000584693 77 ntBASIC3.88□□□□□ -1.79
CUX2O14529 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CUX2O14529 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CUX2O14529 ZNF33CP-201ENST00000432492 2030 ntBASIC3.88□□□□□ -1.79
CUX2O14529 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 Y_RNA.110-201ENST00000363220 99 ntBASIC3.87□□□□□ -1.79
CUX2O14529 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
CUX2O14529 RNU6-272P-201ENST00000411028 104 ntBASIC3.87□□□□□ -1.79
CUX2O14529 USP9YP19-201ENST00000412165 485 ntBASIC3.87□□□□□ -1.79
CUX2O14529 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 AC092798.1-201ENST00000458542 409 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms