Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC079416.3-201ENST00000624479 549 ntBASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 AC244205.2-202ENST00000635781 342 ntBASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 TAB3P1-202ENST00000452645 1634 ntBASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA3F8WFD2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
NPIPA3F8WFD2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
NPIPA3F8WFD2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
NPIPA3F8WFD2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 RNU6-525P-201ENST00000363685 104 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 RNU6-1078P-201ENST00000364522 103 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL445669.1-201ENST00000426743 755 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 MTCYBP39-201ENST00000437562 491 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL831737.1-201ENST00000441288 271 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 RPS3AP22-201ENST00000488297 769 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC093331.1-201ENST00000521474 169 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AP004247.1-201ENST00000531556 1289 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC125611.2-201ENST00000551907 647 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 NCAPGP2-201ENST00000557911 754 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC145350.1-201ENST00000567426 208 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC106900.2-201ENST00000604994 317 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC008443.7-201ENST00000622195 246 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 AC092192.1-201ENST00000633154 1018 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA3F8WFD2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC007656.2-201ENST00000624902 4547 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RPS3AP24-201ENST00000407896 734 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 HSFY4P-201ENST00000415994 1181 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RPL7P34-201ENST00000433316 712 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 UBE2D3P1-201ENST00000436669 444 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 UBE2V1P13-201ENST00000436983 439 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RSU1P2-202ENST00000437884 485 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AL133217.1-201ENST00000450980 425 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC023598.1-201ENST00000472521 361 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC068587.2-201ENST00000478386 781 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC034222.1-201ENST00000494052 532 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC022447.3-201ENST00000506865 495 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC105914.1-201ENST00000511798 226 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 MRPS33P3-201ENST00000513456 322 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 RNU6-579P-201ENST00000516879 102 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AL357094.1-201ENST00000603845 844 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms