Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC011494.1-201ENST00000596454 237 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 GMCL1P2-201ENST00000605230 823 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AL161734.1-201ENST00000609720 557 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC091834.1-201ENST00000614543 472 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC009090.3-201ENST00000616553 565 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AL356118.1-201ENST00000635272 1078 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC138915.1-201ENST00000565427 1685 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNU6-461P-201ENST00000364195 107 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AL358453.1-201ENST00000422522 250 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 HMGB3P12-201ENST00000438745 556 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 RPL37P6-202ENST00000464216 403 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 RPS27P21-201ENST00000486977 252 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC087373.1-201ENST00000524920 491 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 MTCO1P40-201ENST00000574371 625 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC022884.3-201ENST00000579571 248 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 NTAN1P1-201ENST00000603150 646 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AL133507.1-201ENST00000605269 557 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 AC013412.1-201ENST00000610687 192 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 VN1R9P-201ENST00000614184 867 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 ZNF33CP-201ENST00000432492 2030 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 CUL4AP1-201ENST00000514750 1863 ntBASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CPSF4LA6NMK7 SNORA14A-201ENST00000364773 135 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC092447.6-201ENST00000414578 210 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 BX510359.4-201ENST00000423750 193 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 HMGN2P3-201ENST00000433603 273 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 PTP4A1P3-201ENST00000433661 420 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 HMGN2P5-201ENST00000436882 273 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 RBM43P1-201ENST00000476891 1081 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 MIR514B-201ENST00000516774 80 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AP005435.4-201ENST00000529514 284 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AL138976.2-201ENST00000563989 694 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AL022099.1-201ENST00000604551 712 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC022079.2-201ENST00000619739 566 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AP003122.6-201ENST00000623831 495 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC098679.5-201ENST00000624394 571 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 AC026634.1-201ENST00000634369 198 ntBASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF4LA6NMK7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 SNRPEP2-201ENST00000397592 279 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 MTND4LP20-201ENST00000402379 270 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 RNU2-25P-201ENST00000411041 191 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 Z85995.1-201ENST00000415547 335 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 BOLA3P4-201ENST00000418151 400 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 HMGN2P30-201ENST00000423237 256 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 IFNA20P-201ENST00000436840 528 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 CDC42P4-201ENST00000510507 563 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 NBEAP1-201ENST00000554452 979 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 DNAJC8P1-201ENST00000554535 372 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 AC020895.1-201ENST00000595362 272 ntBASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CPSF4LA6NMK7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
CPSF4LA6NMK7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 RNU6-234P-201ENST00000365229 104 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 SNORA6-201ENST00000384033 151 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 RPS20P15-201ENST00000412792 311 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AL445183.3-201ENST00000414168 502 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 RPS3AP9-201ENST00000417027 792 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 TRGV6-201ENST00000417928 299 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms