Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 U8.14-201ENST00000390843 143 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 MCTS2P-201ENST00000394552 546 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AL513475.1-201ENST00000406602 315 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 MIR1294-201ENST00000408503 142 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 RNU6-955P-201ENST00000410497 104 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 UBE2D3P2-201ENST00000424409 445 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC007560.1-201ENST00000426912 237 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 ELOCP13-201ENST00000443934 329 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC096638.1-201ENST00000444678 216 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 CDC42P1-201ENST00000456658 548 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AP001486.1-201ENST00000463339 476 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AL121769.1-201ENST00000469473 401 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC109471.1-201ENST00000511631 612 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC022662.1-201ENST00000580252 331 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 DNAJC19P3-201ENST00000594491 331 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC034236.3-201ENST00000605999 461 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC020763.5-201ENST00000623298 430 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 HPVC1-201ENST00000629899 1198 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC01549A6NIU2 ZNF876P-202ENST00000398732 1485 ntBASIC1.17□□□□□ -2.22
LINC01549A6NIU2 AC046144.1-201ENST00000478559 1853 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 SNORA38-201ENST00000363946 132 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 RN7SKP32-201ENST00000410167 303 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AL356867.1-201ENST00000429623 299 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AL645568.3-201ENST00000433683 316 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 UBE2V1P13-201ENST00000436983 439 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 USP9YP15-201ENST00000442391 422 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC108938.1-201ENST00000451204 136 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 HMGB1P15-201ENST00000453854 435 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC126389.1-201ENST00000477436 290 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 HSPE1P6-201ENST00000479457 291 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC017007.3-201ENST00000479865 435 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 ANXA2P1-201ENST00000505539 926 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 COL6A4P2-205ENST00000509855 506 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 CBX3P4-201ENST00000538909 354 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 COX6CP3-201ENST00000580869 223 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 MIR3162-201ENST00000581818 82 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01549A6NIU2 BNIP3P7-201ENST00000605641 516 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 AL162233.1-201ENST00000620014 944 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 CUL4AP1-201ENST00000514750 1863 ntBASIC1.16□□□□□ -2.22
LINC01549A6NIU2 RNA5SP289-201ENST00000362332 137 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RNU1-42P-201ENST00000364033 160 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RNA5SP425-201ENST00000410336 112 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RN7SKP101-201ENST00000411376 320 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 ARL2BPP3-201ENST00000421226 480 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 XKRYP1-201ENST00000423438 492 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 XKRYP2-201ENST00000432915 492 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 OR10R1P-201ENST00000441524 1141 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC025750.2-201ENST00000442609 450 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RPS24P6-201ENST00000452670 400 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 HMGN1P8-201ENST00000463578 288 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RPL23AP42-201ENST00000471152 471 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 NDUFB4P2-201ENST00000509515 391 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC114781.4-201ENST00000513707 639 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RNU7-193P-201ENST00000516723 65 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 RN7SKP283-201ENST00000517197 270 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 MIR4255-201ENST00000579351 72 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 MIR4429-201ENST00000580105 73 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC002487.1-201ENST00000604565 994 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AL136981.2-201ENST00000617319 734 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 MIR6076-201ENST00000617521 113 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC004777.1-201ENST00000624317 287 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms