Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC011460.1-201ENST00000636268 1834 ntBASIC4.34□□□□□ -1.71
CCDC78A2IDD5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC78A2IDD5 AC105074.1-201ENST00000623380 3095 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC009902.3-201ENST00000606235 2172 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 NUP58P1-201ENST00000502546 1738 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 OR5P1P-201ENST00000299512 925 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RNU6-97P-201ENST00000363387 104 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 Y_RNA.157-201ENST00000363638 102 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 Y_RNA.234-201ENST00000364409 97 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RNU6-1011P-201ENST00000384668 107 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 SNORA11-201ENST00000408789 128 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 ELOCP19-201ENST00000411919 318 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RPS23P10-201ENST00000416185 486 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL353193.1-201ENST00000421444 268 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL356387.2-201ENST00000422272 243 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 PSMA6P3-201ENST00000428242 164 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 GPR143P-201ENST00000434155 205 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RPL7P52-201ENST00000449200 742 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 ABCF2P2-201ENST00000450549 296 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 UBDP1-202ENST00000457888 382 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RNU6-420P-201ENST00000458780 107 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RN7SL812P-201ENST00000493791 279 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC114786.4-201ENST00000508771 728 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 MTCO3P44-201ENST00000510977 541 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 RNA5SP154-201ENST00000516193 111 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AP000907.2-201ENST00000530827 353 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 GLYCAM1-201ENST00000546596 285 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC068790.3-201ENST00000602988 553 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL356218.2-201ENST00000605264 187 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AL445363.3-201ENST00000623080 671 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC093648.1-201ENST00000623546 606 ntBASIC4.33□□□□□ -1.72
CCDC78A2IDD5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC78A2IDD5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 IQCB2P-201ENST00000401788 1633 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 SNORD82-201ENST00000365530 70 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RNU6-339P-201ENST00000384310 107 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RNU6-1207P-201ENST00000384343 107 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 Y_RNA.493-201ENST00000384422 102 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RNU6-456P-201ENST00000384493 107 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RPL7P60-201ENST00000397636 735 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RNA5SP36-201ENST00000410197 133 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RNU4-25P-201ENST00000410569 230 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RN7SKP263-201ENST00000411194 309 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 HLA-N-201ENST00000437516 135 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC127537.2-201ENST00000439258 465 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC093019.1-201ENST00000443135 252 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 FDX1P2-201ENST00000450769 375 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AL121877.1-201ENST00000453704 622 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC021382.1-201ENST00000483523 359 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC090281.1-201ENST00000523019 276 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 PHBP17-201ENST00000528576 541 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC136624.4-201ENST00000573044 370 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 MIR3146-201ENST00000580367 79 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC113403.1-201ENST00000604910 193 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AL158211.4-201ENST00000606988 584 ntBASIC4.32□□□□□ -1.72
CCDC78A2IDD5 AC090948.1-201ENST00000607464 549 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms