Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC090186.1-201ENST00000605991 572 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC012603.1-201ENST00000606424 528 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC103710.4-201ENST00000609301 899 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC128687.2-201ENST00000609657 566 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC010678.1-201ENST00000614118 713 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AL355365.1-201ENST00000616480 294 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AL357080.1-201ENST00000617394 239 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC103858.2-201ENST00000621471 543 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 MIR3651-201ENST00000630427 90 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC007823.1-201ENST00000569932 1566 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC018555.1-201ENST00000567548 1980 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 AC092104.1-201ENST00000497346 1441 ntBASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK11AQ9UQ88 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 UBE3AP2-201ENST00000429033 2259 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 RNU5F-6P-201ENST00000362979 116 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 RNU1-33P-201ENST00000364249 162 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 RNA5SP306-201ENST00000411087 107 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 HMGB1P12-201ENST00000438594 598 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 MTND5P14-201ENST00000441481 1267 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 SSXP1-201ENST00000453640 473 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 SNRPGP3-201ENST00000469405 227 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC087312.1-201ENST00000471411 480 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AP000797.1-201ENST00000478870 387 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 RPS4XP13-201ENST00000483219 789 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC022447.3-201ENST00000506865 495 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC109458.1-201ENST00000508858 316 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AP003033.1-201ENST00000527244 415 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AP002963.1-201ENST00000530590 184 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC012065.4-201ENST00000602445 679 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC097468.3-201ENST00000607956 456 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC013562.2-201ENST00000611632 603 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC244517.1-201ENST00000606030 2086 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AL022578.1-201ENST00000439330 1433 ntBASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDK11AQ9UQ88 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 IPO8P1-201ENST00000455509 3109 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 RNU6-952P-201ENST00000391164 108 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 MTND1P34-201ENST00000438556 671 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AL592447.1-201ENST00000447592 540 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 RPL31P50-201ENST00000471002 296 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC079140.3-201ENST00000511111 550 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC022447.1-201ENST00000515358 464 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 RNA5SP208-201ENST00000516156 78 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC025881.1-201ENST00000518851 512 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 COX6CP8-201ENST00000522620 226 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 RPL21P12-201ENST00000559810 515 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC006116.10-201ENST00000591836 581 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 BBIP1P1-201ENST00000602999 279 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AP000403.1-201ENST00000603349 851 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC100793.4-201ENST00000613683 429 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 AC040168.1-201ENST00000623594 991 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDK11AQ9UQ88 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 RNU6-289P-201ENST00000364093 107 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 SNORD6-201ENST00000365444 73 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms