Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC140479.3-201ENST00000418944 1126 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC087650.1-201ENST00000431445 468 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL031663.1-201ENST00000437445 219 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL162388.1-201ENST00000450912 352 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL481P-201ENST00000477764 299 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC098869.1-201ENST00000481627 292 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC011005.3-201ENST00000491624 395 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL671862.1-201ENST00000515851 349 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-1004P-201ENST00000516584 111 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC008033.2-201ENST00000542626 177 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 BNIP3P1-201ENST00000547295 580 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AL445363.3-201ENST00000623080 671 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AP005435.3-201ENST00000531260 3198 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC097504.1-201ENST00000515103 2415 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 AC008669.1-201ENST00000565823 2178 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC134882.1-201ENST00000603738 1676 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 HSPA8P15-201ENST00000401676 786 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC091179.1-201ENST00000461606 579 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 RPL9P9-202ENST00000466501 579 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 RPL31P50-201ENST00000471002 296 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 TRBV8-2-201ENST00000475637 270 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC109925.1-201ENST00000478069 331 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL814P-201ENST00000487715 300 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 PDCD5P2-201ENST00000507570 312 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 BTG4P1-201ENST00000510421 183 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AP000859.1-201ENST00000525536 307 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 MRPS36P4-201ENST00000534436 298 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 MIR5186-201ENST00000577504 120 ntBASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.65□□□□□ -1.34
PDZRN3Q9UPQ7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.65□□□□□ -1.35
PDZRN3Q9UPQ7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PDZRN3Q9UPQ7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PDZRN3Q9UPQ7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
PDZRN3Q9UPQ7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 Y_RNA.48-201ENST00000362710 103 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 Y_RNA.273-201ENST00000364703 102 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 MIR600-201ENST00000385007 98 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 RN7SKP51-201ENST00000410781 304 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AC096664.2-201ENST00000411843 406 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 BMS1P22-201ENST00000414726 313 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AC004980.3-201ENST00000447046 365 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 NDUFB4P10-201ENST00000452541 359 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SNORD5.1-201ENST00000458800 75 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 RPL9P32-201ENST00000464118 620 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 RPL21P93-201ENST00000480465 489 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 RPS27P23-201ENST00000487608 251 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 COX6CP8-201ENST00000522620 226 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 MIR378J-201ENST00000611988 109 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 AC087385.3-201ENST00000620477 187 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 SPATA2P1-201ENST00000431223 2055 ntBASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.64□□□□□ -1.35
PDZRN3Q9UPQ7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms