Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC007687.1-201ENST00000602704 304 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AL590282.1-201ENST00000610379 1136 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC011330.2-201ENST00000621680 635 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC244205.2-202ENST00000635781 342 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 IGHVIII-44-202ENST00000636235 289 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 FAM133CP-201ENST00000332869 704 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 RNU6-83P-201ENST00000384568 112 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 HSPE1P26-201ENST00000405341 275 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 RPL7P53-201ENST00000421245 739 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 MTCYBP31-201ENST00000438855 1122 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 RPS24P6-201ENST00000452670 400 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC092451.1-201ENST00000480211 153 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC092045.1-201ENST00000495716 1231 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC006499.2-201ENST00000513470 337 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 SNORA31.20-201ENST00000517111 133 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AC022022.2-201ENST00000602989 360 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AP000484.1-201ENST00000620067 1252 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 AL049780.3-201ENST00000624612 1583 ntBASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM4Q9ULL8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 RNU6-600P-201ENST00000362524 99 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 TPMTP2-201ENST00000414372 726 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 EZH2P1-201ENST00000431167 291 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC016696.1-201ENST00000446949 318 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC010285.1-201ENST00000470580 392 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC104090.1-201ENST00000506341 1171 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC004062.1-201ENST00000509926 645 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 RN7SKP132-201ENST00000516001 208 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 AC012020.1-201ENST00000624541 1728 ntBASIC5.9□□□□□ -1.46
SHROOM4Q9ULL8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 SNORA71.1-201ENST00000364523 117 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 RNU2-37P-201ENST00000410695 177 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 AC092447.6-201ENST00000414578 210 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 HMGB1P15-201ENST00000453854 435 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 AC021205.2-201ENST00000480069 347 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 MIR4769-201ENST00000584126 77 ntBASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM4Q9ULL8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 GABPAP-201ENST00000419271 1356 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 MTND4P34-201ENST00000572715 1371 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC095050.2-201ENST00000510748 1458 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 RNA5SP502-201ENST00000362694 119 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 HIGD1AP15-201ENST00000416198 280 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 CST9LP2-201ENST00000437612 320 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC093281.2-201ENST00000510153 597 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 MTCO2P32-201ENST00000514865 403 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC107952.2-201ENST00000606048 486 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AC092106.3-201ENST00000611308 722 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 AL357080.1-201ENST00000617394 239 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 CRYM-AS1-204ENST00000637983 556 ntBASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM4Q9ULL8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-28P-201ENST00000362378 107 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-157P-201ENST00000383957 107 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AL356131.1-201ENST00000405826 414 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 MTCYBP38-201ENST00000417160 1123 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 XKRYP1-201ENST00000423438 492 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AC007742.1-201ENST00000425789 329 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms