Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL161781.1-201ENST00000354277 403 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 RNY4P24-201ENST00000362735 96 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-259P-201ENST00000383999 107 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-769P-201ENST00000384407 104 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 SNORA40.3-201ENST00000390964 122 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 RAP1BP3-201ENST00000407180 549 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 RNA5SP44-201ENST00000410446 133 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC127526.1-201ENST00000417526 366 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC092832.1-201ENST00000422934 400 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC006946.1-201ENST00000429106 328 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MTCYBP45-201ENST00000435243 565 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 ST13P14-201ENST00000474095 734 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 POU5F1P7-201ENST00000508759 541 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 OR5AP1P-201ENST00000529730 940 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR3913-1-201ENST00000577744 102 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC112187.2-201ENST00000604345 283 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL034351.1-201ENST00000605288 668 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL357078.3-201ENST00000607528 618 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR6868-201ENST00000611215 58 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MTND5P26-201ENST00000426018 1752 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKIPSDQ9NZQ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RNA5SP258-201ENST00000362750 119 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-1283P-201ENST00000365314 105 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-809P-201ENST00000384461 107 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR548F1-201ENST00000408667 84 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RN7SKP266-201ENST00000410232 287 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RPL7AP73-201ENST00000413490 353 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC245052.5-201ENST00000416320 649 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 EIF1P1-201ENST00000421436 341 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AL513174.1-201ENST00000423182 629 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 MRPS10P2-201ENST00000431226 381 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC109583.1-201ENST00000432156 268 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC091862.1-201ENST00000438016 1100 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 HMGB1P37-201ENST00000439613 609 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC244505.5-201ENST00000443639 207 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 snoU109.4-201ENST00000458953 143 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RPL21P11-201ENST00000461458 483 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AP001025.2-201ENST00000490908 477 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 TXNP6-201ENST00000510190 310 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC034159.1-201ENST00000513885 583 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 RN7SKP298-201ENST00000515950 94 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.92□□□□□ -1.78
NCKIPSDQ9NZQ3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms