Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MTND5P3-201ENST00000438536 1800 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RNU6-462P-201ENST00000362659 105 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RNU6-263P-201ENST00000363811 107 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RNVU1-3-201ENST00000364313 161 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RNU1-64P-201ENST00000365443 163 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MIR30B-201ENST00000384850 88 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 HMGB1P17-201ENST00000403495 628 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RN7SKP58-201ENST00000411010 305 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 HMGB1P11-201ENST00000413899 637 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 TPMTP2-201ENST00000414372 726 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC245054.2-201ENST00000415639 319 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 HMGB1P12-201ENST00000438594 598 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MTND1P30-201ENST00000441241 901 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MTND5P14-201ENST00000441481 1267 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 TAF9P1-201ENST00000445421 515 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 TAF9P2-201ENST00000454958 515 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC109486.1-201ENST00000486833 374 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC090453.1-201ENST00000495560 436 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 DSTNP2-201ENST00000504533 515 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MIR2116-201ENST00000517221 80 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC013828.2-201ENST00000532487 235 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC007224.1-201ENST00000564410 144 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MIR3160-1-201ENST00000577972 85 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC015917.1-201ENST00000579654 510 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RNU6-88P-201ENST00000606801 100 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AL354798.1-201ENST00000622505 329 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 MIR4496-201ENST00000635896 61 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NDE1Q9NXR1 DDX43P2-201ENST00000604753 1354 ntBASIC3.22□□□□□ -1.89
NDE1Q9NXR1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.21□□□□□ -1.89
NDE1Q9NXR1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.89
NDE1Q9NXR1 GDI2P1-201ENST00000429312 1336 ntBASIC3.21□□□□□ -1.89
NDE1Q9NXR1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 RPL23AP57-201ENST00000332361 466 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 Y_RNA.51-201ENST00000362725 102 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 RNU6-730P-201ENST00000383954 104 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 SNORA70C-201ENST00000384538 135 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL031679.1-201ENST00000400616 525 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 BTF3L4P1-201ENST00000413813 468 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AC244035.1-201ENST00000430042 390 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 MED14P1-201ENST00000430517 648 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 CKS1BP5-201ENST00000434172 273 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AC122718.1-201ENST00000439448 744 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL831737.1-201ENST00000441288 271 ntBASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.21□□□□□ -1.9
NDE1Q9NXR1 AL360221.1-201ENST00000445989 335 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms