Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AP003467.2-201ENST00000520175 319 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 HMGN1P28-201ENST00000521340 364 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AP002453.2-201ENST00000533503 320 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC123904.2-201ENST00000548059 300 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL157394.1-201ENST00000562983 1224 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC009977.1-201ENST00000586015 570 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL451086.1-201ENST00000605596 223 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC010678.1-201ENST00000614118 713 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL355810.1-201ENST00000614629 552 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL139089.1-201ENST00000620372 975 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC068137.4-201ENST00000638485 296 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 TEX21P-201ENST00000447107 1476 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 Y_RNA.126-201ENST00000363382 111 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 Y_RNA.318-201ENST00000365131 97 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-432P-201ENST00000384196 109 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 SOD2P1-201ENST00000396543 562 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RNU2-71P-201ENST00000411395 189 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MTATP6P4-201ENST00000427725 675 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 PGBD4P3-201ENST00000440731 581 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 snoU109.1-201ENST00000459339 135 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RPL7P15-201ENST00000461190 712 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 VN1R17P-201ENST00000472048 1090 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RAP1BP2-201ENST00000478270 544 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 ACTR3P3-201ENST00000480448 893 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC114967.1-201ENST00000504890 259 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 ARL2BPP4-201ENST00000506854 471 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MTCO1P35-201ENST00000515270 228 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RN7SKP83-201ENST00000516512 178 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MRPL49P2-201ENST00000521066 465 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC125611.2-201ENST00000551907 647 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RPL21P5-201ENST00000554662 472 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC007224.1-201ENST00000564410 144 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AP001330.4-201ENST00000604350 154 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL034351.1-201ENST00000605288 668 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC121334.2-201ENST00000605387 271 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC007038.2-201ENST00000608095 740 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC108747.1-201ENST00000609508 535 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC006023.2-201ENST00000609916 167 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC131902.3-201ENST00000611767 581 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC009509.4-201ENST00000619202 509 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 MIR4275-201ENST00000636486 87 ntBASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SLC6A13Q9NSD5 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 RNU5E-8P-201ENST00000363502 116 ntBASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 RNU5A-8P-201ENST00000364102 114 ntBASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 Y_RNA.436-201ENST00000384097 102 ntBASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 SNORA70C-201ENST00000384538 135 ntBASIC3.59□□□□□ -1.83
SLC6A13Q9NSD5 RPS3AP3-201ENST00000411933 242 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms