Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC104389.3-201ENST00000445629 235 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 OR6K5P-201ENST00000447050 945 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC108938.1-201ENST00000451204 136 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AL359385.1-201ENST00000456509 365 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 NAP1L1P3-201ENST00000462291 880 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AP000852.1-201ENST00000472460 573 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC009901.1-201ENST00000506703 541 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 RNU6-751P-201ENST00000516382 101 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 ZNF705CP-201ENST00000530515 889 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 HSPE1P7-201ENST00000604681 321 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC008083.4-201ENST00000615076 444 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 AC090740.1-201ENST00000623193 2262 ntBASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN4Q9NRR5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 NUP58P1-201ENST00000502546 1738 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AL137014.1-201ENST00000420490 1226 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 MTCO2P17-201ENST00000424336 677 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 VN1R42P-201ENST00000424651 344 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 MTCO1P39-201ENST00000426148 480 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 RPL23AP16-201ENST00000441715 421 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 RPL23AP45-201ENST00000476406 468 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AC087272.1-201ENST00000523624 533 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 EEF1B2P4-201ENST00000551398 348 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AC106782.4-201ENST00000568264 210 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 RPL23AP84-201ENST00000571193 464 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 AL160237.3-201ENST00000604114 1013 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 CRYM-AS1-204ENST00000637983 556 ntBASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
UBQLN4Q9NRR5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC091564.4-201ENST00000533934 2194 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AL672167.1-206ENST00000356293 943 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNA5SP139-201ENST00000364340 117 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNU1-138P-201ENST00000384093 164 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 U3.29-201ENST00000391296 212 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AL122016.1-201ENST00000403365 367 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNFT1P2-201ENST00000443064 757 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AP001486.1-201ENST00000463339 476 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 RNA5SP320-201ENST00000516263 124 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 HMGB1P1-201ENST00000522557 636 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC087373.1-201ENST00000524920 491 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC124293.1-201ENST00000530034 493 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AL022099.1-201ENST00000604551 712 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC006213.5-201ENST00000619673 288 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AL353748.2-201ENST00000622148 471 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC002064.3-201ENST00000623448 346 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 AC091925.2-201ENST00000625059 256 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 ZNF663P-202ENST00000641770 1131 ntBASIC2.28□□□□□ -2.04
UBQLN4Q9NRR5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
UBQLN4Q9NRR5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
UBQLN4Q9NRR5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 AL512283.1-201ENST00000606756 1384 ntBASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 AL513185.3-201ENST00000433335 1300 ntBASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 NACA3P-201ENST00000359690 648 ntBASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 ANAPC10P1-201ENST00000395991 556 ntBASIC2.27□□□□□ -2.05
UBQLN4Q9NRR5 ARF4P3-201ENST00000397387 509 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms